Brassica rapa (field mustard): 103835756
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Entry
103835756 CDS
T03449
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X4
KO
K03243
translation initiation factor 5B
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
brp03012
]
103835756
Translation factors [BR:
brp03012
]
Eukaryotic type
Initiation factors
eIF-5
103835756
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
103835756
NCBI-ProteinID:
XP_009110194
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All DBs
Position
A08:19379284..19385962
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AA seq
1013 aa
AA seq
DB search
MDRKNTSACRGDEDHPFALSFKGGENPKNKSYNVRFDLLGIEDYNEEAEDDVNVELSDEL
MLGRQVTEETNSKSEDLGENSRSKKKKKNKSGKTAHEEEDLDKILAELGITPVSPAQPEL
VAPSDCSKDGEEETVLSASSKKRKKKKDKDKKVYASSVEAKDEPSQPHRKVPKHILEMQE
MVARRKEAEEMKKKEEEEKLRKEEEERRIQEEREKEAEEIKQKRKIREKEKMLKKKQEGG
ILTEKQKRDKAFKNKMLSDAGMLLASDKQGDSSKRPVYGNKRKPARTKANDSGSVQVKDH
ANITATLHDIDSAVKEKKQEAGDEEDDWEAKSDDSVTIMGDYDDGKDAPWLVVKKEIKDT
AAKAHCSGPVISDRLASKAEVADKPKESRPKVDDATRPKDATKRGNDSEVNEVAKESLRS
PICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELRPDAKL
KVPGLLVIDTPGHESFSNLRSRGSNLCDIAILVVDIMHGLEPQTIESLNLLRKRNTEFIV
ALNKVDRLYGWKTCKNAPIEKALALQSKDVVIEFNMRLTQVITQFKEQGLNTEIYYKNKE
MGDTFSIVPTSAISGEGIPDLLLYLVMWSQKTMVEKLTFVDKVQCTVLEVKVIPGHGTTI
DVVLVNGVLHEGDQIVACGSQGPIITTVRSLLTRHPMKELRVKGTYQHHREVKAAQCIKI
TAQGLEHAVAGTSLHVIGPDVDVDEAKKTAMEDMKSVMSLVDKSGEGVYVQASTLGSLEA
LLEFLKSPDVKIPVSGIGLGPVHKKDIMKAGVMLEKKKEYATVLAFDVKITTEARELADN
MGVKIFSADIIYHLFDQFKGYVKDVRDEERKETASEVVFPCVLKILPNHVFKRGNPIILG
VEVIDGILKVGTPMCFLKEIGKSRVFVDLGRVASIHKDKKPLDDAKKGQQVAIKIVASNP
GEEKMFGEDFDIEDELVSHISRRSIDILKTLYRDELKNELKLVLKLKMLFKIQ
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaagaacacgagcgcgtgtagaggagacgaagatcatccctttgccttgtcc
ttcaagggaggtgaaaaccctaagaataaatcatataatgtaaggtttgatctgcttggt
attgaagattacaacgaagaggcagaggatgatgttaatgttgaattgagtgatgagtta
atgcttggaagacaagttaccgaagaaactaatagtaagagtgaggatcttggggaaaac
tcaaggagtaagaaaaagaagaagaacaagagtggaaagactgcacatgaagaagaagat
ttggacaagattcttgcagaacttgggataactcctgtttcaccagcacaacctgaacta
gttgcaccttcagattgctcaaaggatggagaagaagagactgtcctgtcagcttcatca
aagaaaaggaaaaagaagaaggacaaggacaagaaagtgtatgcttcttccgtggaggct
aaggatgagccatcacagcctcataggaaagttcctaaacacattctagagatgcaagag
atggttgcgcggcggaaagaagctgaagagatgaagaagaaggaagaggaagagaagctg
aggaaagaggaagaggagcgacgcattcaggaagagcgagaaaaggaagctgaagagatt
aaacagaagaggaagattagggaaaaggagaagatgctgaagaagaagcaagaaggaggg
attcttacagagaagcagaagagggacaaggctttcaagaacaagatgttgtctgatgct
ggaatgcttcttgcttcagacaaacagggtgattcctcaaagcgtcccgtttacggcaac
aaaagaaaaccagctcggacaaaagcaaacgactctggttctgtccaggtgaaagatcat
gcaaatataacagctacgttgcatgacatagattcagctgtcaaggaaaagaaacaagaa
gctggtgatgaggaggatgattgggaagcaaaaagtgatgattctgttactataatgggt
gattatgatgatgggaaagatgcaccttggcttgtggttaagaaagagataaaagacact
gctgcaaaggcccattgttcaggtcctgtcatctctgatagactagcatcgaaggctgaa
gttgcagacaagccaaaagaatctagacctaaggtggatgatgctactaggccaaaggat
gctactaaaaggggtaatgactcagaagttaatgaagttgctaaagaaagtcttcggtct
cccatttgctgcatcatgggccatgttgatactggcaaaacaaagctgttggactgcatc
agaggaacaaatgttcaggaaggagaagcaggaggtatcactcagcagattggtgcaact
tatttcccggcagaaaacatccgtgagaggaccaaggagttaagacctgatgcaaaactc
aaggtgccaggtctattggttattgatacgccaggacacgagtcattctcaaatctacgg
tcaaggggttcaaacttgtgtgacattgcaattctagtggtggatataatgcatggtcta
gagccacaaactatagagtctcttaatcttttgagaaagaggaacacagagttcattgtt
gccttgaataaggtggataggctatatgggtggaaaacatgcaagaatgctcctatagag
aaggctttggcgctgcaatccaaagatgtggttattgaatttaacatgaggcttactcag
gttataacccagttcaaagaacaaggactcaacactgagatttattacaagaacaaagaa
atgggagacactttcagtattgtgcctactagtgctattagtggggaagggattccagat
ctgttgctatatttggttatgtggtctcagaaaacaatggttgagaaacttacatttgtt
gacaaagtgcagtgtaccgtccttgaggtcaaagttattccaggccatggtacaacaatt
gatgttgttttggtcaacggtgtactccatgaaggtgatcaaatcgttgcttgtgggtca
cagggaccaattataacaactgttagatcactattgactcgtcatcctatgaaagagcta
cgtgtgaagggtacatatcagcatcatagagaagtaaaggctgcgcaatgtatcaagata
actgcacagggccttgaacacgccgttgctggtacttccttacatgtgattggacctgat
gtggacgtggacgaagccaagaaaacagccatggaagatatgaagtcagtcatgagcttg
gttgacaaaagtggtgaaggagtttacgtacaagcttcaacgttaggatctttggaagca
ttactagagttcttgaagtcaccagatgtaaaaatacctgtaagtggtattggcctagga
ccagtgcataaaaaggatatcatgaaggccggtgtaatgctagagaagaagaaagagtac
gctacggttttggcttttgacgtgaagataactactgaggctcgcgaactagctgacaac
atgggagtcaagatcttctccgctgatattatctatcatctgtttgatcagttcaagggt
tatgtcaaggatgtccgagatgaagaaaggaaagaaacagcatctgaagtagtgtttcca
tgtgtccttaagattttaccaaaccatgtcttcaaaagaggaaacccaatcatccttgga
gtcgaggtcatcgatggtatactcaaggttggaactcccatgtgctttctaaaagagatt
gggaagtcgagagtgtttgtggatcttggtcgcgttgcatctattcacaaagacaagaag
ccacttgacgatgccaagaaaggccagcaggttgctattaagatcgttgcctctaaccct
ggagaagagaaaatgtttggggaggactttgatatagaagacgagcttgtcagtcatatt
tctaggagatccatcgacatactcaaaacactctacagggatgagttgaagaacgagttg
aagcttgttttgaaacttaaaatgttgttcaagatacaatag
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