Brassica rapa (field mustard): 103835792
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Entry
103835792 CDS
T03449
Name
(RefSeq) 4-coumarate--CoA ligase-like 8
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00592
alpha-Linolenic acid metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
103835792
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
103835792
NCBI-ProteinID:
XP_009110225
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Position
A08:19547351..19554807
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AA seq
652 aa
AA seq
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MTLAVSMVGFGRFTITHLTRMVSSTLRSGGNAHSGRIFSIGSLPCIALPRLLPFAGLHLN
PRKFSSDAFNTSSKPGLATPGLHHPFNHLNKMAVCKRSSSSSSLSPIHPRNGFCNANSTF
YSKRNPLPLPANSSLDVTTFISSQAHHGTTAFIDAATGHRISFSDLWRSVDNVADCLHRD
MGIRRGDVVLILSPNSISIPLVCLSVMSLGAVVTTANPLNTASEISRQVADCNPKLAFAT
PDQAPKLAASGAISVVLTEEDEERVGSTLGVRVVGSLSEMMKKKPSERRVRNRVNRDETA
MLLYSSGTTGRSKGVIISHGNLIAHVARYIAEPLEPNQTFLCTVPLFHTFGLLNYALATV
ALGSTVVILRKFDLHGMMAAVEKYRATTLVLVPPILVAMINGSDLIKARYDLTSLKTVRS
GGAPLSKEVTESFLEKYPTVDIFQGYALTESNSSGASTDSVEESKRHGAVGLLSSGVEAR
VVDPDTGRIMGVNQTGELWLKGPAITKGYYRNEEATKETINSEGWLKTGDLCCIDDDGFV
FILDRLKELIKYKAYQVPPAELEGLLLTHPEIVDAAVIPFPDREVGQLPMAYIVRKTGSL
LSEKSLMEFVAKQVAPYKRVRKVAFVSSIPKNPSGKILRKDLIKLATSNSTV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgcagtatctatggtggggtttggtagattcactatcactcatttaacacgt
atggtatcatcaactctgcggtctggtggaaatgcacactctggtaggatcttttccatt
ggctcgctgccctgcatagctcttcctcggctccttccctttgctggcttgcaccttaat
ccccggaagttctcttcagatgcattcaacacttcatcaaaacccggtttggcaactcca
gggctgcatcatccatttaaccacctgaacaaaatggctgtttgtaaaagatcatcatca
tcttcttctttatctccaatccatcctagaaacggtttttgcaatgcaaactccacattc
tacagtaaacgcaacccattgccactcccggctaactcctcccttgacgtcaccacattt
atctcctctcaagctcaccacggcaccaccgccttcatcgacgccgccacaggccaccgt
ataagcttctccgatctctggagatccgtagacaacgtagccgactgtctccatcgcgac
atgggaataaggagaggcgacgtagtactcatcctctctcccaactccatctccatccct
ctcgtctgcctctccgtcatgtctctcggcgccgtagtcaccaccgcgaatcctctcaac
accgcctcagaaatctccagacaggtcgcagactgcaacccaaagctcgccttcgcgact
cctgaccaggctcccaaactcgccgcctcgggggccatctccgtcgtcctcacggaggag
gacgaagagcgggtgggatccactctcggagtccgagtcgtcgggagcttgagcgagatg
atgaaaaagaaaccgagcgagcggcgagtcagaaaccgagttaaccgggacgaaacggcg
atgcttctgtactcctccggaaccacagggcgaagcaaaggagtgataatctctcacgga
aacttaatagcgcacgtggcgagatacatcgccgagccactggagccgaaccagaccttc
ctctgcaccgttccgttgttccacaccttcgggttacttaactacgctttggccaccgtg
gctttgggttcgacggtggtgattctccggaagtttgacctccacggtatgatggcggcg
gtggagaagtacagagcgacgactctggttttggtgccgcctattttggtagctatgatc
aacggctcagatttgatcaaggccaggtacgatttgacctcgctgaaaacggttagatcc
ggtggagctccgttgagcaaagaggttacggagagttttttagagaagtatccaacggtt
gatatttttcaagggtacgctttgactgaatcaaacagctcaggagcttcgactgattcg
gtggaggagagtaagagacacggtgcggttgggctgttgtcgtcaggtgtggaagcgcgg
gttgtggatccggatacgggtcggatcatgggtgtgaaccaaacgggcgagctttggctc
aaaggtcccgccatcacaaaaggttattatcgaaacgaagaagctacaaaagaaactatt
aattcagaaggatggctaaaaacgggagatctctgctgcatcgacgatgatggatttgtt
tttatattggatcgattgaaagagctaatcaaatacaaagcttaccaggtccctccagct
gaactagaaggtttgctgctcactcatcctgaaatcgttgatgccgcagtgatcccattt
ccagacagagaagtagggcagcttccgatggcgtacattgtaagaaaaacaggaagcttg
ttatcagagaagtcattgatggagtttgtagccaaacaagtggcaccatacaagagagta
cgaaaggtggctttcgtgtcttccattccaaaaaatccatcagggaagattctgcgcaag
gacctcatcaagctcgcaacttccaactccacggtttaa
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