Brassica rapa (field mustard): 103835815
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Entry
103835815 CDS
T03449
Name
(RefSeq) polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM
KO
K11462
polycomb protein EED
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103835815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103835815
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103835815
PRC2.2
103835815
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD_LRWD1
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
103835815
NCBI-ProteinID:
XP_009110247
UniProt:
A0A398AR14
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All DBs
Position
A01:22440046..22442812
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AA seq
369 aa
AA seq
DB search
MSKIALGNESLVGSLTPSNKKSYKVTNRIQEGKKPLYAVVFNFLDSRFFNVFVTAGGNKI
TLYNCLEDGAISALQSYSDEDKEESFYTVSWACGVKGNPFVAAGGVKGIIRVIDVNNETI
HKSLVGHGDSVNEIRTQPMKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSV
DFHPTEIYRFASCGMDTTIKIWSMKEFWTYVEKSYTWTDDPSKFPTKFVQFPVFTASVHT
NYVDCNRWFGDFILSKSVDNEILLWEPQLKENSPGEGTSDVLQRYPVPMSDIWFIKFSCD
FQLSSLAIGNQEGKIYVWDLKSCPPVLITKLSHNQSKCVIRQTAMSVDGSTILAACEDGT
IWRWDVITK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagatagctttagggaacgaatcacttgttgggtctttgactccatcgaacaag
aagtcgtacaaagtgaccaataggattcaagaagggaagaagcctctgtatgctgttgtt
ttcaacttccttgattctcgtttcttcaatgtcttcgtcaccgctggtggaaataagatt
acgctgtacaattgtcttgaagatggtgccatatctgcattgcaatcctattctgatgaa
gataaggaggagtcgttttacactgtaagctgggcgtgtggcgttaaggggaacccattt
gttgcggctggaggagtgaaaggcataatccgagtcattgacgtcaacaatgaaacgatt
cataagagccttgtgggccacggggattcagtgaatgaaatcaggacacaacctatgaaa
cctcagcttgtgattactgcaagcaaggatgaatctgttaggttgtggaacgttgaaact
gggatatgtattctgatatttgctggagccggaggtcatcgttacgaagttctaagtgtg
gactttcatcccactgagatttaccgttttgctagctgtggtatggacaccactattaag
atatggtcaatgaaagaattttggacttatgttgagaagtcatacacatggacggatgat
ccatcaaagttccccacaaagtttgtacagttccctgtatttactgcttcagttcataca
aactatgtagattgtaaccgttggtttggtgattttatcctttcaaagagtgtggacaac
gagatcttgttgtgggaaccacaactgaaagagaactctccgggagagggtacttcagat
gttctccaaagatacccggttccaatgtctgacatctggtttatcaagttttcatgcgac
ttccaattaagctctcttgcaatagggaatcaggaaggaaagatttatgtctgggatttg
aaaagttgccctcctgttttgattacaaagctgtcacacaatcaatccaaatgtgtgatc
aggcaaaccgctatgtccgttgatggaagcacaattcttgctgcctgcgaggacgggacc
atatggcgttgggacgtgatcaccaagtag
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integrated database retrieval system
