Brassica rapa (field mustard): 103835944
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Entry
103835944 CDS
T03449
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
brp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103835944
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103835944
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103835944
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103835944
03036 Chromosome and associated proteins [BR:
brp03036
]
103835944
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103835944
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103835944
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103835944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
103835944
NCBI-ProteinID:
XP_009110391
LinkDB
All DBs
Position
A08:20142737..20147415
Genome browser
AA seq
512 aa
AA seq
DB search
MNGGGGGDGAASSGGGGGGPPPSLEWRFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLA
TGDRGGRVVLFERTDNKDNGVSRRDAEQMDYTVRHPEFRYKTEFQSHEPEFDYLKSLEIE
EKINKIRWCQPASGALFLLSTNDKTIKYWKVQEKKIKKISEMNIDPSKTPGQPSSSSPPP
VVANGVHADPAHDYLSKFSFPPGGLPSLRLPVVTSLETSLVARCRRVYAHAHDYHINSIS
NSSDGETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAY
SSSKGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILSRD
YMTLKLWDINMDSGPVASYQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSN
LFRVFGASQGSTEAATLEASKNPMRRQIQTPARPSRTISSMTRMVRRGSESPGAEANGNG
YDFTNKLLHMAWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtggtggtggtgacggtgctgcttctagtggtggtggtggtggtggtcct
cctccgtctttagagtggagattctctcaggtctttggcgagcgaaccgctggagaagaa
gtccaggaagttgacatcatttcagccattgaatttgataagagtggagatcatcttgca
actggtgaccgtgggggacgagtggttctttttgagaggacggataataaagataatggt
gtgtccaggagagatgctgagcagatggactacacagttaggcatcctgagtttcgatat
aaaacagagtttcagagtcatgaaccagagtttgactatctcaagagtttggaaatagag
gagaaaatcaacaaaatcaggtggtgtcagccagcaagtggtgcattgtttctgctttcc
acaaatgataaaaccatcaagtattggaaggtacaagagaagaagatcaagaaaattagt
gaaatgaatattgatccgtcgaaaactccaggtcaaccaagttcaagtagccctcctcca
gtagttgctaatggagtacatgccgatccagcgcatgactacctgagcaaattttccttt
cctccaggaggccttccatctctgcgtttgcctgtggtgactagcctggagacaagcctt
gtggcaagatgccgaagagtgtatgctcatgcacatgattaccatattaattcaatctca
aacagcagcgatggagaaaccttcatttcggccgatgatctgcgcgtaaatctctggaat
ttggaaatcagcaaccagagcttcaacattgttgatgttaagcctacaaacatggaggac
ttaactgaggttattacatctgctgagtttcatccaatccattgtaatatgctcgcatat
agcagctcaaaaggctccatccgtttgattgatatgaggcaatcagctctgtgtgattct
catactaaattgtttgaagaaccggaagcacctggttccagatcatttttcacagagata
attgcctcaatttcagatattaaattttcaaaggatgggagatacatacttagtcgcgat
tatatgaccctcaagctgtgggacataaacatggattctggtccggttgcatcttatcaa
gttcatgaacatctgagacccaagctatgcgatctatatgaaaatgactccatctttgat
aaattcgagtgttgtctaagtggtgatggattgagggtagcaacaggctcttacagcaat
ctattccgtgtatttggagcgtctcaaggaagtactgaagctgcaactttggaagctagc
aaaaaccctatgaggaggcaaatccagacacctgcaagaccttccagaactattagcagc
atgacacgtatggttagacgaggatcagagagtccaggagcagaggcgaatgggaacgga
tatgacttcacaaataagttgctgcacatggcttggcacccaacagagaactcaattgct
tgtgcagcagcgaacagcttgtacatgtactatgcatga
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