Brassica rapa (field mustard): 103835972
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Entry
103835972 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103835972
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103835972
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103835972
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103835972
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103835972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
zf-MYST
Motif
Other DBs
NCBI-GeneID:
103835972
NCBI-ProteinID:
XP_009110426
UniProt:
M4DJE0
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All DBs
Position
A08:20266770..20271794
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AA seq
892 aa
AA seq
DB search
MLEPRGADIPLLFLVLVVFPVVAYILLGKWSDISKKRGRANLLAQMAAEEAFRAETEVNV
NRGVRFEAAATENRGLRTKTKAAVSAASGAVRDDFVSGVSGTVAEQRYESVAATCGVPVS
NEFHVCARCFSPAKTRCSRCKSVRYCSGQCQIIHWRLAHKDECIPVEACSSSSERASFEN
ESVLHDQDMDATMYSNGTKQKAKGKTSKISVEFESLGISTPQANTQGRKSVGKPNSSKSN
RESFSGEAACAGGDNKKGHTKHKLRSNSAAVETNSRRHSVDNSSMQMNGQAFVSGMQETC
ESNLGARSSFGCPNAQYPSNGTRTATLRKSGEQPCTETSKKGLVPAVSKTVRSKDTCIAE
ESNGISSTMGLMKMMGLRNSTKHGDRHQNLRMLFPYEEFVKFFQCEVFYLSPRGLVNCGN
SCYANAVLQSLTCTKPLVAYLLQRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRI
LSQMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDTRLQETTLVQHMFGG
RLRSKVKCLRCGHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCA
GYVKARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYM
LYAVIVHLDTLNASFSGHYISYVKDLRGNWFRIDDSEIHQVPMTQVMSEGAYMLFYMRSY
PRPLRGEHNGKAQVRHSQSQPRDEMKEQRKPVNRFKPRADHHKNFESSSEWSLFTSSDEA
SFTTESTRDSFSTVDYTDGCNVLDSSSPFSIFNNLRHNVEPSPHNTVACRMFSGTKSETR
YFVEEETNHNNTVVMDSAPTSHDYYQQSMYVNYETNPGFNCQDQTYSYEQNW
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccaaggggagcggacatacctttattgttcttggttttggttgtgtttcct
gtggtagcttacatattattaggtaaatggagtgatatttctaaaaagagagggagggct
aacttgctggctcagatggcagctgaagaagcttttagagctgagaccgaagttaatgtg
aataggggtgtaagatttgaggctgcggctacagagaatagaggtctaagaaccaagacc
aaggccgccgtttctgctgcgagtggtgctgtaagagatgattttgtgtctggtgtgagt
gggactgtcgctgagcagagatatgagtctgtggctgctacgtgtggggtccctgttagt
aatgagtttcatgtatgtgcaaggtgttttagtcctgctaagacacgctgctcgagatgc
aaatctgttagatactgctctgggcagtgccaaataattcactggaggctagctcataaa
gatgaatgtatccctgtggaggcttgctcttcttcatctgagagggcttcctttgagaat
gagtctgttttgcatgaccaagacatggatgctacaatgtatagtaacggtaccaagcag
aaagcgaagggaaagacttcaaaaatctctgtagaatttgaaagcttgggtatctctaca
ccacaagccaacacacaagggagaaaaagcgtaggaaaaccaaattcttctaagtccaac
cgagaatcatttagtggtgaagctgcatgtgctgggggcgataacaagaagggtcacact
aaacataagttgagaagcaacagcgctgccgtggaaacaaattctagaaggcattctgtt
gataactcttctatgcaaatgaatggacaagcttttgtaagtggtatgcaagaaacttgt
gaaagcaatttgggagcaagaagctcttttggttgtccaaacgcacaatatccttcaaac
gggaccagaactgctactctgcgcaaatccggagaacaaccatgcacagagacgagtaag
aagggactggtccctgcagtatcaaagactgttaggtctaaggatacatgcattgctgaa
gaaagcaatggtatctcctcaaccatgggtttaatgaaaatgatgggtttaagaaactct
acaaagcatggtgatcgacatcaaaacctgagaatgctttttccatatgaggagtttgtt
aagttctttcaatgtgaggtgttttacttatcacctaggggcctagtgaattgtggaaac
agttgctatgcaaacgctgtcttgcagtccttaacatgcacaaagccactcgttgcatat
ttgcttcaacgatcacattcaagatcttgttctgggaaagattggtgccttatgtgtgaa
cttgagcaacatgtaatgatgcttagagaatctggaggtccactttctgctagcagaatt
ctctcacagatgcggagtataaattgtcagattggtgatgggagtcaagaagatgctcat
gagttcttaaggcttttagttgcctctatgcaatcaatatgtttggagagacttggaggt
gagactaaagtggatacaagactgcaagaaacaaccttagttcaacatatgtttggtgga
cgtctccgctcaaaggtgaaatgcttgaggtgtggtcatgaatcagaaagatacgaaaac
ataatggatctcacactagagatatacggatgggtagaatctcttcaagatgctctgact
cagtttactagaccagaagatctcgatggagaaaatatgtatagatgcagcaggtgcgct
ggatatgttaaagcaagaaaagaattgagcattcatgaagcaccaaacattctcacaatt
gttcttaagagattccaggaaggaagatacgggaaaataaacaaatgtataagctttcct
gaaatgctggatatgataccttttatgacaagaaccggagatgttcctccactttatatg
ctttatgctgttatagttcacctggatactctcaacgcatctttctctggtcattacatt
tcctatgtcaaagatttgagaggcaactggttcagaatagatgattccgagattcatcaa
gtgccaatgactcaagttatgtcagaaggagcttatatgttgttctacatgagatcgtat
ccgcgtcctctaagaggagaacacaacggaaaagctcaggttcggcattcacagtcacaa
ccaagagacgagatgaaggaacagaggaaaccagttaaccgcttcaaaccgagagcggac
caccacaagaactttgagtcatcaagcgagtggtctctcttcacgagctcagacgaagct
tcattcaccacagaatcaaccagggactctttcagcaccgtggactacacagatgggtgc
aacgtcttagactcttcctctcctttctccatcttcaacaacttacgccacaacgtggag
ccgtcgccgcacaacaccgtcgcctgcagaatgttctcaggtaccaagtcagaaacccgg
tatttcgtggaggaagaaacgaatcacaacaacacggtcgtgatggactcagcaccaaca
tcccatgactattaccagcagagtatgtatgtaaactatgagactaacccagggtttaac
tgtcaggatcaaacttacagttatgaacaaaactggtag
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