Brassica rapa (field mustard): 103836160 Help Entry 103836160         CDS       T03449                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism brp  Brassica rapa (field mustard) Pathway brp04148   Efferocytosis Brite KEGG Orthology (KO) [BR:brp00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     103836160  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:brp04131]     103836160 Membrane trafficking [BR:brp04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     103836160    Hops complex     103836160 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf_RING_Vps8 zf-RING_11 Nup54_57_C zf-RING_Vps41 zf-C3HC4 zf-RING_UBOX zf_RING_Vps8_fungal Motif Other DBs NCBI-GeneID:  103836160 NCBI-ProteinID:  XP_009110642 LinkDB All DBs Position A08:complement(20846888..20853352) Genome browser AA seq 988 aa AA seqDB search MDQGRQVFAVDLLERYATKNRGMITCMASGNDVIVLGTSKGWIIRHDFGLGSSYDIDLSV GRTGDQSIHKVFVDPGGSHCVATVTGVGGAETFYTHAKWPKPRVLSRLKGLLVNAVAWNK QQITEVSTKEIILGTQDGQLFEMAVDEKDKREKYVKFLFELEELPEAFMDLQMETANISS GMRYYVMAVTPTRLYSFTGIGTLESVFASYKERAVRFMELPGEIPNSELHFFIKQRRAVH FAWLSGTGIYHGGLNFGAQHSNPNGDENFVESKALLDYSKLSDGTEVVKPSSMALSEYHF LLLIGNKVKVVNRISEQIIEELHFDISADSASRGIIGLCSDASAGLFYAYDQNSIFQVSV IDESRDMWKVHLDLKDYAAALANCRDPLQRDQVYLVQAEAAFANKEYLRAASFYAKVNYV ISFEEVTLKFISINELESLRTFLLRKLDTLSKNDKCQITMISTWATELYLDKINRLLLED DTAIENRNSEYHSVIQEFRAFMSDSKDVLDEATTMKLLESYGRVEELVYFANLKEQYEIV IHHYIQQGEAKKALEVLQKSSVSEELQYKFAPELIMLDAYETVEAWMASKNLNPRRLITA MMRYSSEPHAKNETHEVIKYLEFCVHQLHNEDPGIHNLLLSLYAKQEDDSALLRFLQCKF GKGRENGPEFFYDPKYALRLCLKEKRSRACVHIYSMMSMHEEAVALALQIDPELAMAEAD KVEDDEDLRKKLWLMIAKHVVKQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNKQIEQLKEEMNDATRGADNIRNDISALTQRYAVIDREEECGVCK RKILTMTGDFRMAQSYFSAGPLAPFYVFPCGHSFHAQCLITHVTSCAHEEQAEHILDLQK QLTLLGSEPPRNINGNRSDEPITSTTTADKLRSELDDAIASECPFCGELMINEISLPFIK PEETQHSASWDLRPQTNLANQRTISLPV NT seq 2967 nt NT seq  +upstreamnt  +downstreamnt atggatcaaggaaggcaagtgtttgcagtggatcttctcgagagatatgccacaaagaat cgtggcatgatcacatgtatggcttctggaaacgatgtgattgttcttggaacaagcaaa ggatggatcatccgccacgattttggacttgggagttcttatgatattgatctctctgtt ggtcgaactggggaccaatcgatccacaaggtttttgttgatcctggtggtagccattgc gttgctacggtgactggtgttggaggagctgagactttttacactcatgctaaatggcct aagccgcgtgtcttgagccgtttgaaaggcttgctggttaacgcggtggcttggaacaag cagcagataacagaagtttcaactaaggagatcatccttggcactcaggatgggcagctg tttgagatggctgtcgatgagaaggataagagagagaagtacgtcaagtttttgttcgaa cttgaagaacttcccgaggccttcatggatttacagatggaaacagccaacataagcagt ggaatgaggtactatgtgatggctgtaactcctactcgactctattccttcaccgggatt ggaacattagaatctgtctttgctagttataaagaacgtgcagttcgttttatggaactt cctggtgaaataccaaacagtgaactacatttctttataaagcaacgaagagcggtgcat tttgcatggctttcaggaacaggaatttatcatggtggcctaaattttggagctcagcac agtaatccaaatggtgatgagaactttgtggagagcaaagcgctgttggactactcaaaa ctgagtgatggcactgaggtagtcaagcctagttcaatggcactctcagagtatcatttc ttgcttcttattgggaataaggttaaggttgtgaatcggataagtgaacaaatcatagaa gagctccattttgatatatcggctgattcagcttcgaggggcatcataggactttgcagc gatgcctctgctggccttttctatgcgtatgatcagaattcgatcttccaggtttctgta attgacgaaagcagagatatgtggaaggttcacctagacttgaaagattatgctgcagct ttagcaaactgtcgtgaccctctccagagagaccaagtttatttagttcaggcagaagct gcatttgccaacaaggaatatctacgagcagcatcattctatgccaaagtcaattatgta atatcttttgaagaggtcaccttgaagtttattagtataaacgaactggaatctttgaga acattcctgttgcgaaagcttgatactctctcaaagaacgataaatgccaaattacgatg atatcaacatgggcaacagagctatatctggacaagataaatcgtctgcttttggaagat gacactgctatagaaaatcgtaactcagagtatcactcagtcattcaagaattccgtgct ttcatgagcgacagcaaggatgtattagatgaggcgaccaccatgaaacttctggagagt tatggtcgggttgaagagttggtatattttgcaaacctgaaggagcagtatgaaatcgtt attcaccattatattcagcaaggggaagcaaagaaggctttggaggtgctccagaaatct tcagtttcagaagagcttcagtataaatttgcgccagagcttattatgcttgacgcgtat gaaaccgttgaagcatggatggccagtaaaaatcttaacccaaggagactaattactgca atgatgcgttactcaagcgaacctcatgcaaaaaacgagacacatgaagtcataaaatat cttgagttttgcgtccaccaattgcataacgaggatccagggattcacaatttacttctc tcattatatgccaagcaggaagatgacagtgctcttctccgtttcctgcaatgcaaattt gggaaaggtcgagagaacggccctgaatttttctatgatcccaaatatgcgttgcgcttg tgtctcaaggaaaagagaagtcgtgcctgtgtccatatatacagcatgatgtctatgcat gaagaggcagtagcccttgctcttcagattgacccagagcttgctatggctgaagctgat aaggttgaagatgatgaagacttgagaaagaagttgtggctgatgattgcaaagcatgtc gtcaagcaggaaaaaggagccaaaagggaaaacataaggaaagctattgcctttctcaag gaaactgatggccttctaaagattgaagatattttgccgttctttcccgactttgcctta attgatgacttcaaggaagcgatttgctcgtctctggaggattacaacaagcaaatagaa caactgaaagaggagatgaatgatgccacacgtggtgcagataatattagaaatgatatc agtgccttaactcaaagatatgctgtgatcgaccgtgaagaggaatgcggggtttgtaaa cgtaaaatcttgacgatgaccggggatttcagaatggcccagagttatttttcagctgga ccactggctcctttctatgtatttccttgtggacattctttccatgcacagtgcctgatc acacacgtcacaagctgtgcacacgaagagcaagccgagcatatactcgatctgcagaag cagctgacattgcttggtagcgaaccgccgaggaatataaatggtaatcgatctgatgaa cccataacgagcacaactactgcagacaagcttcgatcagagctagatgatgctatcgcc agtgaatgcccattctgtggagaactaatgatcaatgagatcagtctgccttttattaaa cccgaggaaacgcaacattctgcttcatgggacctccgaccacaaaccaacttagctaac cagaggaccatttctttgcctgtttga

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