Brassica rapa (field mustard): 103836167
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Entry
103836167 CDS
T03449
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103836167
Enzymes [BR:
brp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
103836167
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
103836167
Prokaryotic type
103836167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
FAD_binding_7
Motif
Other DBs
NCBI-GeneID:
103836167
NCBI-ProteinID:
XP_009110652
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All DBs
Position
A08:20883142..20885610
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AA seq
495 aa
AA seq
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MSSTTTAVQPGRIRILKKPSLLLPDQTPGPVVYWMFRDQRLRDNWALIHAVDLANRTNAP
VAVVFNLFDQFLGAKARQLGFMLKGLRQIHRQIESLQIPFFLLQGDAKETIPEFMKECGA
SHLVTDFSPLREIRSCKEEVVKRTSVALAIDEVDAHNVVPMWAASGKLEYSARTIRGKIN
KLLPEYLVEFPEIEPPKKKWGGMVDKVVDWDSIIDNVVREGAEVPEVEWCVPGEDSGMEV
LMGRQEGFLTKRLRNYSTDRNNPVKPKALSGLSPYLHFGQISAQRCALEARKVQKTYPQA
VDTFLEELIVRRELSDNFCYYQPHYDSLEGAWEWARKSLMDHASDKREHTYSLEQLEKGQ
TADPLWNASQLEMVYQGKMHGFMRMYWAKKILEWTKGPEEALSISIFLNNKYELDGRDPS
GYVGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFNVDSYISYVKSLVSVTKKKRKA
EEQLTRDSIDHPKAK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacgacaacggcggttcaaccgggtcggatccggatcctgaagaagccctct
ttgctacttccggatcaaacgccgggtcccgtagtttactggatgttcagagaccaacgg
ctgagagataactgggctctgatccacgccgtcgatctggcgaacagaaccaacgcgccg
gtggccgtcgtgttcaatctgttcgatcagttcctcggcgcgaaggcgaggcaattaggg
tttatgttgaaaggtctccgccagattcaccgtcaaatcgaatctcttcagattccgttt
tttcttttacagggagatgcaaaggagacgattcctgagtttatgaaagagtgtggggct
tcacatttggtgactgacttctcgcctttacgggagataagaagctgtaaagaggaggtt
gtgaagaggacgagtgttgcgttagcgatagacgaagttgatgcacacaatgtggttcca
atgtgggctgcttcggggaagttggagtacagtgctagaaccatacgggggaagattaac
aaactgttgcctgagtacctcgttgagtttcctgagattgaaccgccgaagaagaagtgg
ggagggatggtggacaaggttgttgattgggatagcatcatcgataacgttgtaagggag
ggtgcggaagttcctgaagttgaatggtgtgtgcctggagaggactcaggcatggaagta
ttgatggggagacaagaggggtttttgacgaaaaggttgaggaactattcgactgatagg
aataatcctgtgaagccgaaagcactctctggtctctctccttatctgcattttggacag
atctcagctcaaaggtgtgccttagaggcacgtaaagtccagaagacttaccctcaggca
gttgatacgttcttggaagagttgattgtacgaagagaactctctgacaacttttgctac
tatcaacctcactatgattctttggagggagcttgggagtgggcacggaagtcattgatg
gatcatgcttcagataagagagaacacacttactcgttggagcagttagagaagggacag
acagcagatcctctatggaatgcttcacagttagagatggtctatcaggggaaaatgcac
ggtttcatgagaatgtattgggcaaagaagattctagaatggaccaaaggacctgaagag
gctctctcaatctccatctttctaaataacaagtatgagttagatggtcgtgacccgagt
ggatatgttgggtgtatgtggtccatatgcggcgttcacgatcagggatggaaagagagg
ccggtgtttgggaagatacggtacatgaactacgcgggttgcaaaaggaagtttaatgtg
gacagttacatctcttatgttaagagtttggtgtcagtaacaaagaagaagaggaaagct
gaagaacagctcaccagagactctattgaccaccccaaagctaaatag
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