Brassica rapa (field mustard): 103836200
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Entry
103836200 CDS
T03449
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
brp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103836200
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103836200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103836200
Membrane trafficking [BR:
brp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
103836200
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Motif
Pfam:
Longin
Synaptobrevin
SlyX
Motif
Other DBs
NCBI-GeneID:
103836200
NCBI-ProteinID:
XP_009110687
UniProt:
A0A397YGU0
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Position
A08:complement(21037434..21039167)
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AA seq
218 aa
AA seq
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MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGHNEASRMSVETGPY
IFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRI
YADKAKDLNRQALIRKWAPVAIVLGVVFLLFWVKNKLW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatgacattgatagctcgtgtcactgacgggttgcctctagctgagggtctt
gacgatgggcgtgacttgccagattccgacatgtataagcaacaggtcaaggctctcttt
aagaatctctccagaggtcataacgaagcctcgagaatgtctgttgaaactggcccctat
atcttccattacatcattgaaggacgtgtatgctacttgacgatgtgtgaccgctcttac
cctaagaaactcgcgtttcaatatctggaggacctcaagaatgagtttgaacgtgtcaat
gggcctaacattgaaactgctgctcgaccttatgcctttattaagtttgatactttcatt
cagaaaacgaagaaactgtaccaagacactcgtacgcaacggaatattgctaagctgaat
gatgagctctatgaggttcatcaaataatgacgaggaatgtgcaggaagtccttggtgtt
ggtgaaaagctggaccaggtgagcgagatgtcgagccggctaacatctgaatctcgtata
tatgctgacaaggctaaagatttgaaccgtcaggctttgatcaggaagtgggcaccagtt
gccatcgtgcttggggtcgtgttccttcttttctgggtcaagaacaagctctggtaa
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