Brassica rapa (field mustard): 103836225
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Entry
103836225 CDS
T03449
Name
(RefSeq) tryptophan synthase beta chain 1 isoform X1
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00260
Glycine, serine and threonine metabolism
brp00400
Phenylalanine, tyrosine and tryptophan biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp01230
Biosynthesis of amino acids
Module
brp_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103836225
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
103836225
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
103836225
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Motif
Pfam:
PALP
DAO
Motif
Other DBs
NCBI-GeneID:
103836225
NCBI-ProteinID:
XP_009110717
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Position
A08:complement(21148448..21151394)
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AA seq
477 aa
AA seq
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MSSTKIQLRWQPLPRVPARNHRMINSVVFGVPIKSHHRVSDVLSRTSGPSFGSVTSVSVR
TNARPFLRGDGNGRFGRFGGKFVPETLMSRLRDLEEELDFVLSDHEFQAELTTALRDYVG
RETPLYLAGRLTEHYRNKSRTTGDGPEIYLKREDLGHSGSHKMNNALAQAMIARRLGCSR
VVAATGAGQHGVATAAACAKLCLECTVFMGTTDIEKQSSNVLSMKLLGAQVSSLEGTFQD
ASSEAIRNWIENLETTYYLSGTVVGPHPSPVMVREFQSVIGKETRRQAKRLWGGKPDVLV
ACVGSGSNALGLFNEFVGDEDVRLVGVKAAGLGLDSGKHSATLAVGDVGVYHGSMSYLLQ
DDQGQILRPHSIGVGLEYPGVGPEKSFLKETGRVEFYTATDKEAIQACMLLSRLEGIIPA
LEASHALAFLDKLVPILHDGAKVIVNCNGRGDKDIDTLIQRGMPSSLSRVTKMSHYT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccactaaaatccagttacgatggcagccccttcctagggttccggcaagaaac
caccgtatgataaactctgttgtttttggagttcccataaaaagtcaccaccgtgtaagc
gacgtactcagtcgtacgagtggtccatcttttggttctgtgacttctgtttcagtaaga
actaacgcgagaccctttcttcgtggcgacggtaatggtcgtttcgggaggttcggtggg
aagtttgtaccggagactttgatgtcgcgcctgagagatcttgaagaggaattagatttt
gttttgagcgatcatgaatttcaggcggagcttacaacagcgttaagagactatgtagga
agagagacgcctctctacttggccggacgtttaaccgaacactacagaaacaaatctcga
accactggagatggacccgagatctacctgaaaagggaagatctaggccatagtgggtcc
cacaaaatgaacaatgctctcgctcaagcaatgattgcccggcggcttggttgcagccgt
gtggtagcggccacaggagccggccaacatggggtcgccaccgcggctgcttgtgcaaag
ctctgcttggagtgtactgttttcatggggaccactgatatagagaaacaatcctctaat
gtcctttccatgaaactccttggggctcaggtatcatccttagaaggaacatttcaagat
gccagttcagaggcgattcgaaattggatagaaaacctagaaaccacatactacttatca
gggacggtcgtaggaccacacccgagtccggtaatggtacgtgagtttcaatctgtgatt
gggaaagagacgagaaggcaagcaaaacgactatggggtggtaagcctgatgtgttggta
gcttgtgtggggagtggttcaaacgcattgggattgttcaatgagtttgttggggatgag
gatgtgcggctagtaggggtcaaggccgcgggactggggcttgattcagggaaacattca
gctactttggccgttggagatgttggtgtgtaccatggttctatgagctacttgttgcaa
gatgatcaaggacagatacttagaccacactccataggagtagggttagagtatcccgga
gtcggaccggagaaaagctttttgaaagaaaccgggagagtcgaattctatacagcaaca
gataaagaagccattcaagcgtgcatgctattgagcagattggagggtataatcccagca
ttggaagcatctcacgcgctcgcattcctcgacaaacttgttcctattctgcatgatggt
gccaaagtgatcgtgaattgcaatggccgtggcgacaaagatatagacactcttatccaa
agaggcatgccctcttctctttctcgagtcaccaagatgtcacattacacttga
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