Brassica rapa (field mustard): 103836270
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Entry
103836270 CDS
T03449
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103836270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103836270
03041 Spliceosome [BR:
brp03041
]
103836270
03032 DNA replication proteins [BR:
brp03032
]
103836270
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103836270
Spliceosome [BR:
brp03041
]
Complex A
U1 snRNP components
Sm proteins
103836270
U2 snRNP components
103836270
Complex B
U1 snRNP components
103836270
U4/U6.U5 tri-snRNP components
103836270
Complex C
U2 snRNP components
103836270
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103836270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103836270
NCBI-ProteinID:
XP_033133556
LinkDB
All DBs
Position
A08:complement(19538724..19540777)
Genome browser
AA seq
97 aa
AA seq
DB search
MIECEDNWNCQLEDITFTAKDGKVSQLEHVFIRGSKVRFMVIPDILKHAPMFKRLDARIK
GKSGSLGVGRGRAAMRGKAPATGRGTGGRGAVPPVRR
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagtgtgaggataactggaactgtcagctcgaagacatcacctttaccgctaag
gatggtaaggtatcacagcttgagcatgtcttcattcgaggcagcaaagtcaggttcatg
gtcatacctgacattctcaagcatgctccaatgttcaagcgcttagatgctagaatcaag
ggaaagagcggatcactgggtgttggcagaggtagagctgcaatgcgaggaaaagccccg
gctactgggcgtggaactggaggaaggggagctgtaccacctgtgagaagatga
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