KEGG   Brassica rapa (field mustard): 103836382
Entry
103836382         CDS       T03449                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    103836382
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103836382
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103836382
Protein phosphatases and associated proteins [BR:brp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103836382
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103836382
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 103836382
NCBI-ProteinID: XP_009110879
UniProt: M4EPL5
LinkDB
Position
A08:complement(21837366..21843304)
AA seq 1145 aa
MGTELMRICVKEESDELPSVPPGFESYATFTLKRVVPDPGAAMESVSSVSNQGEMEIESD
EAKAARSLRRRPWINYDDDSNALSQNLDQTCGVKPSLPKGVTRGCAECNDCQKVTARWQP
DEARRPDLEDAPIFHPTEEEFEDTLSYIAKIRPKAEKYGICRIVPPPSWKPPCPLKEKQV
WEGSKFTTRVQRVDKLQNRSSMKKVSKLSNQMRRKKRKCMKMGMDPGSASPEMSELETFG
FEPGPGFTLKDFKKYADEFKAQYFKKSETSTDSECTWEPAVEDVEGEYWRIVDKATEEIE
VLYGADLETGVFGSGFPKISSSHEAASSSEEKYAKSGWNLNNFSRLPGSLLKHEGSDISG
VLVPWLYIGMCFSSFCWHVEDHHLYSMNYMHWGAPKLWYGVAGKDAVKLEEAMRKHLPDL
FEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNCGFNCAEAVN
VAPVDWLPHGQNAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLLKKNTIDNLRWK
EFSGKDGILAKTLKARIDMERTRREFLCSSSLALKMHSNFDATNERECCICFFDLHLSAA
GCRCSPEKYSCLTHVKQLCSCPWVAKYYLFRYDMDELNVLLEAVEGKLSSVYRWARQDLG
LALSEHLSGSKMETSEEEPQAAALLGKDLQLKVTPREDLSRGLENTLLLKVKEEQLTPSH
CMKPVKEEEGISMTAAKSTSGKKSSQSVPDDVILLSDDEHDIPRKRVSEKRDADSPGKHL
KIQERPSHVLALEAPSKTAAPMIEKQANSLPDRQITMPLPTNDQRAVQGDVTSSVSHAEV
NAVADGLAHNTSNQDGVNPTSSKSKISGGLAIQEVVDGIRSTSGTPSCSQNNSPDRIIRQ
KGPRIAKVVRRINCNVEPLNYGCVLSGKSWCNRRAIFPKGFRSRVKYINVLDPTRMSFYV
SEILDAGRNSPLFMVYLEGVPSEVFAHLSPTRCWEMVRDRVNQEISKQHKAGKLDLPPLQ
PSGSPDGFEMFGYTSPAILQAIEALDVNRVCTEYWDSRPYSRPQVQFPANALLLREANTS
IQSSDVRSLQKAPRQRLLPAGTKSNLKVLLKKANMEELSSLQEVLNESNVDLVTELVKEE
IQKRC
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggggacagagctgatgagaatctgtgtgaaggaagaaagtgatgagctgccatctgtt
cctcctgggtttgaatcatatgctactttcactttaaaaagagttgtccctgaccctggt
gctgctatggaaagtgtttcttctgtatcaaatcaaggtgagatggagattgaatctgat
gaagccaaagctgctcggtctctacggcgtagaccttggattaactatgatgatgatagc
aatgccttgtctcaaaatcttgatcaaacttgtggagtgaagccttctctacctaagggt
gtgaccagaggatgtgcagaatgtaatgactgccaaaaggtaactgcgagatggcaacca
gatgaagctcgaaggcctgaccttgaagatgcccctatattccaccctaccgaagaggag
tttgaagatactttgagctatatagctaaaataagaccaaaggctgagaagtacggaatc
tgccgaattgttcctcctccttcctggaaacccccttgcccgctgaaagaaaagcaagta
tgggaaggttctaaattcaccacacgcgtccaaagagtggataagcttcagaaccggagc
tctatgaagaaggtttcaaagctttctaatcaaatgagaaggaagaagaggaagtgcatg
aaaatgggaatggatcctggctccgcaagcccagaaatgagtgagcttgagacgtttggg
ttcgaacctggtccagggttcactctaaaagacttcaaaaagtatgctgacgagttcaag
gctcagtactttaaaaagagtgaaacatctacggacagtgaatgtacatgggagccagcg
gttgaggatgttgaaggtgaatattggcggattgtagataaagctaccgaagagatagag
gtgctgtatggtgctgaccttgaaactggggtatttggtagtggttttcccaagatatca
tctagtcacgaggctgcttcttcttcagaagaaaaatatgcaaaatcaggctggaactta
aataatttctcaaggcttccaggatcacttcttaagcatgaaggcagtgacatctctggt
gttcttgtaccgtggttgtatattgggatgtgcttttcttctttctgctggcatgttgaa
gatcaccacttgtattcgatgaattacatgcactggggtgcaccaaaactgtggtacggt
gttgcggggaaggatgctgttaaactagaggaggcgatgagaaagcatttgcctgacctt
tttgaagaacagcctgatttgcttcataaactagttacacaactctccccatcaaaactg
aaaaccgcaggagtacctgtgcaccgctgcgtccagcatgctggagagtttgtcttgact
ttccctcgggcatatcatgctggattcaactgtggtttcaactgtgctgaagctgtgaat
gtagcaccagtcgactggctgcctcatgggcagaatgctatagagttatactgtcaacag
ggtagaaaaacgtcaatctcgcatgataaactcttgcttggggcagcaagagaagtagtg
aaagccgactgggagcttaacttgctaaagaagaatacaatagataacttgaggtggaaa
gagtttagtggaaaggatgggatcttggccaaaacactcaaggcacgtattgacatggaa
cgtacaagaagagagtttctgtgcagctcttcacttgcgttgaagatgcatagtaatttc
gatgctaccaacgagagagagtgttgtatatgcttctttgatttgcacctgtccgctgct
ggttgccgttgttccccggagaagtattcatgtttgactcatgtgaagcagttgtgttcc
tgtccgtgggtcgctaaatattatctgtttcgctatgatatggatgaactgaatgttctt
cttgaggctgtggaaggaaaacttagttctgtgtatagatgggcgcgtcaagatttggga
ttggctttaagtgaacacctctcaggaagcaagatggagactagtgaggaagaaccacaa
gcagctgcacttttagggaaagatttacagttaaaagtaacaccaagagaagatctaagt
agagggttagaaaatacgttacttctgaaagtcaaggaggagcaattaacaccaagccac
tgtatgaagccagtcaaagaagaagaaggcatctctatgacagctgctaagtccacaagt
ggaaaaaagagttcacagagtgtacccgatgatgtgatactcctaagtgatgatgagcat
gacatacctaggaaacgagtttctgagaaaagagatgcagattcgcctggcaagcattta
aaaatacaggagagaccaagccacgttttagcgttagaagcgcctagtaaaactgctgct
cccatgatagaaaagcaagcaaattctttgcctgatagacaaatcactatgccattgcct
actaatgaccaaagagcagtgcaaggggatgttacaagttctgtatcgcatgctgaagtt
aatgccgtagctgatggacttgctcataataccagcaaccaagatggtgtaaaccctact
agctctaaatccaaaatctctggaggtttggctatacaggaagtggttgatgggataaga
agtacctctggtacaccgtcttgttcgcaaaacaatagtccggataggatcatccgccaa
aagggtccacgtatagcaaaagttgtgaggagaatcaattgcaatgtagagcctctaaac
tatgggtgtgtgctttctggaaaatcatggtgcaaccgccgagcaattttccctaaaggg
tttcgtagtcgggtcaagtacataaacgttttggatccgacgaggatgagcttctacgtt
tcagagattcttgatgctggacgcaacagtccattgttcatggtttacttggagggtgtt
cccagtgaggtgtttgctcacttgtcgcctacaagatgttgggagatggtaagagataga
gtaaaccaagagataagtaagcagcacaaagctggtaagctagatcttcctcctctgcag
ccttctgggagtcctgacggttttgaaatgtttggatacacgtcacctgcaatcttacag
gccattgaagcattagatgtgaatagagtttgcacagagtattgggactccaggccttac
tcgcggccacaggttcagttccctgcaaatgctcttcttctcagagaagccaacacaagc
atacaatcatcggatgtgagaagtctccagaaagctcccagacaacgtctattacctgct
ggaacgaagtctaatctcaaagttctgctcaagaaggctaacatggaggaactgagctca
cttcaagaggtgttaaatgagtctaacgtagatttggtgaccgaacttgtgaaggaagag
atccagaagcggtgctga

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