Brassica rapa (field mustard): 103836472
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Entry
103836472 CDS
T03449
Name
(RefSeq) tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103836472
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103836472
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
103836472
NCBI-ProteinID:
XP_009110979
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Position
A08:complement(22160919..22164929)
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AA seq
591 aa
AA seq
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MKKARVLLKPSLLSRATTIFSSLSPSRLLSNQMETKPSPDPERYCYDPVLRWDPQVEDYF
NKAYGPDHFAQISKALTRPSSYSCIRVNTVKTTSDAVIEKLTKILNESDDGLKLLQSDGR
SSPISKCQIPGLEYVVFVHGSGPHRIEYGAGLESPPKEVLVSRKCAEAVLRGAQVYVPGV
LACTAHVEKGDAVAVCVAMEQPGDDEGDWSVNMTRGTTLQGLPSDPFYCERSGLYIGMGT
TMLSRAGMFRVPHGVAVDLSNRVFRLPSFHNVLEGEIFLQNLPSIIAAHALDPQKGERIL
DMCAAPGGKTTAIAIRMNDEGEIVAADRSHNKVLDVQKLSAEMGLSCITTCKLDALKSVR
LPNALSDSTTLVNGDNIGSVTNHSDLSSNEEMAPGRSEAEENASTEQPSGGDNVSQAEIR
KNKGRLKNGRGRTQSQGGRAGKSQGFPPNSFDRVLLDAPCSALGLRPRLFAGLETVISLR
NHGRYQRKMLDQAVQLVRVGGILVYSTCTINPSENEAVVRYALDKYKFLSLAPQHPRIGG
PGLVGRCEFPDGYVEEWLKPGEEEMVQKFDPSSELDTIGFFIAKFSVGPKD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcgagggttctgcttaaaccctctttactctccagagccaccaccatcttc
tcctctctttctccgtcacgccttctctctaaccaaatggagacgaagccttctccggat
ccagagcgttactgttatgatccagtgttgcgatgggatcctcaagtagaagactacttc
aacaaagcttatggacctgatcacttcgctcaaatctcaaaggctctcacgcgtccgtct
tcctactcgtgcattagagtgaacacagttaaaacaacgagcgacgcggttatcgaaaag
cttacgaagatcttaaacgaatccgacgatggcttgaagctattgcaatccgatggaagg
agtagtcccatctccaagtgtcagattcctggtttggagtatgttgtttttgtccatgga
tcaggcccgcatagaattgaatatggagctgggcttgaaagcccacccaaggaggtgtta
gtgagcaggaagtgtgctgaagctgttcttagaggagctcaggtctatgtcccaggtgta
cttgcttgcactgcccatgttgagaaaggagatgcggttgctgtctgtgttgctatggaa
cagcctggtgatgatgaaggtgactggagtgttaatatgacccgtgggaccacccttcag
ggtttaccatcagatcctttctattgtgaacggagtggactatatatcggcatgggaacg
actatgctgtcaagggctggcatgtttcgtgttcctcatggagttgcggtggatttgagc
aatagagttttcagattgccttctttccacaatgtcctcgagggggagatatttcttcaa
aacctgccaagcattattgctgctcatgctcttgatcctcagaaaggggagagaatacta
gatatgtgtgcagcaccaggagggaagactactgcaattgctatacgtatgaatgacgag
ggagagatagtggcagcagatagatctcataacaaagtgctggatgtccagaaattatct
gctgagatgggcttaagttgcataacaacgtgtaaattggatgcgctgaaatctgttcgt
cttccaaacgcactcagtgattcaacaacattagttaacggtgacaatattggttctgtt
accaaccattctgatttatcatcaaatgaagaaatggcacctggaagatctgaggctgag
gaaaatgccagcactgaacagccaagtggaggggataatgttagccaagctgaaattagg
aagaataaaggaaggctgaaaaatggtcggggaagaactcaatcccaaggtggaagggct
ggaaaatcacaaggtttcccgcctaatagttttgatagagtcctactagatgctccttgt
tctgctcttggcttgagacctcgtcttttcgctggactggagactgttatatcgttgagg
aaccatggaaggtaccagcgtaaaatgttggaccaggctgttcaattggtccgcgttggg
ggaatccttgtatactcaacatgcacaattaaccctagcgagaacgaggcggtggttcgc
tatgctctggataaatacaaattcctttccttagcaccgcagcatcctaggattggaggc
cctggtctagttggtcgatgtgaattccctgacggatatgtcgaggagtggttgaaaccg
ggtgaagaagaaatggttcagaaattcgacccgtcatctgagctcgataccatcggcttc
tttatagctaagttcagcgtcggccccaaagattaa
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