Brassica rapa (field mustard): 103836550
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Entry
103836550 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103836550
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103836550
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103836550
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103836550
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103836550
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103836550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
103836550
NCBI-ProteinID:
XP_009111075
UniProt:
A0A397YHX8
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All DBs
Position
A08:22428281..22432404
Genome browser
AA seq
939 aa
AA seq
DB search
MGKKAKKKARTPTKENLSKKVSEQPSEIAEGDAVQAVKEKQACVHFDKGLNLDKLLEKIK
SSRQIKCQECKEGVHGKRGAKEKGSKGKHAFSSSAAEPKADKKAIWVCLECGAFVCGGVG
LPTGAQSHVVRHIRVTHHRLMIQWENPQLRWCFPCQSLLPVEKEENGEKKDVLLEVVKLM
KERSLNSLPPSEAEEESSGSGSVTSDIKLQGAVTTSGIEARDGYVVRGLVNLGNTCFFNS
IMQNLLSLDRLRDHFLNEDASGIVGTLACSLKKLFAETKPEAGLKSVINPRVFFGSFCVK
APQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVGVSDSDEKSSTLIESVFGGETSSI
VSCMECGHSSKVYEPFLDLSLPVPFKKTPPKKQPTVSLAKKAKLPPKRVAKHVSKVSKVS
KVLPTKALSDLKAPGKASVVTADSDASSSSFAPIDNGTVSETQSVDKQGSESVSQCDTVF
DSFWLDVIGPEPFEDETNVDMEDSVSDKIPTTEANQILPGPDNSSNTSTLEGNTERLMQD
NDETIKAETIMDDKDIQATQPDECTATSNISAEINQASCIGGGDTGLGESSSSVNPWDEE
ELPLMVADSQVLYMPYKENISYDDDKPAVEEGEGEASSSSFVAADHEPPQDNDFVGLGGL
FDEPEITEGPVVFGPPCNPEASSGGAGFMAFSSESDPEEIDDSDSPVSVERCLAHFTKPE
ILSDDNAWNCENCSKNLKLQRLREKRKSKKDESRSSNTSNGWVSENEDVSAVKQDPSDGS
SSVKDNEREAMSSNDSESEGEEDSEKVITVKRDATKRVLVNKAPPVLTIHLKRFSQDLRG
RLSKLNGHVSFKEVIDLRQYMDSRCSGEDSPVYRLAGLVEHSGTMRGGHYVAYVRGGGKK
GKESVWYNISDAHVRQVSLDKVMHSEAYILFYERIFTQD
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagcgaagaagaaggccagaacgccaacaaaggagaatctctccaagaag
gtctctgagcagcctagtgaaatagctgagggagatgctgttcaagcagttaaggagaaa
caagcttgtgtgcatttcgataagggtcttaatttggataaactgttggagaagattaag
tcttcccggcagattaagtgtcaagaatgcaaggaaggggtgcacggtaagagaggagct
aaggaaaagggtagtaagggaaaacatgctttctcttcttctgctgctgagccaaaagct
gacaagaaggctatttgggtttgtttggaatgtggggcttttgtttgtggaggtgttggt
ttgccaactggagcgcagagtcacgttgtgaggcatatcagagtgactcaccaccgtttg
atgattcaatgggagaaccctcagctaaggtggtgttttccgtgccagtcgctgctccct
gttgaaaaagaagagaacggtgagaagaaagatgtcttgttggaggttgtgaaactgatg
aaagagcggtctttgaacagcttacctccatctgaggccgaagaggagagctctggaagt
ggtagtgtcactagtgacatcaaattacaaggcgctgtcaccaccagtggtatagaagca
agggatggttacgttgtgcgagggttagttaaccttgggaacacatgtttcttcaattcg
ataatgcagaatcttctttccttggatcggttacgcgatcacttcttgaatgaggatgcg
tctggtatcgttgggactcttgcttgttccctgaagaaattatttgcggaaacgaaacca
gaagcaggcttaaagagtgtgataaatcctagagtctttttcggttctttctgtgttaag
gcgccacagtttaggggatacgaccagcatgacagccacgagctgctacgctgtctgcta
gattccttgagcaccgaagaatcagccttgagaaagaagcgcggtgttggtgtttctgat
agcgatgagaaatcttctactcttatagaatctgtatttggaggcgaaacgtcgagcatt
gtttcttgtatggagtgcgggcattcctcaaaagtctatgagccgttcttggatctttct
ttaccagtaccgttcaagaaaacccctcctaagaagcagccaaccgtttctctagcgaag
aaagctaagcttccaccaaaaagagtcgctaagcatgtgtccaaagtaagtaaagtttca
aaagtcctcccaactaaggctctgtcggatctgaaagctccggggaaagcttcggttgtc
acagctgattcggatgcttcctcttccagttttgcgccaattgataatggtacggtttca
gagactcaatcggttgataagcagggctcagaaagtgtaagccaatgtgatactgttttc
gatagcttctggttggatgttattggaccagaaccctttgaagatgagacgaatgtggat
atggaagatagtgtcagtgacaaaatcccaactactgaggctaatcaaattcttccaggt
ccagataattcttccaacacctcaactttggaaggtaatacagagaggctgatgcaagat
aatgacgagactataaaggcagaaaccatcatggatgataaagatattcaagctacgcag
cctgatgaatgcacagctacaagcaatatttctgctgaaatcaaccaagctagttgcatt
ggtggtggtgatactggtttaggtgaaagttcttcctcggtgaatccttgggatgaggaa
gagcttcctttgatggttgcagattcgcaagttctgtacatgccgtacaaagaaaacata
tcctatgatgatgataaaccagctgtggaagaaggcgagggtgaggcatcatcatcttcg
tttgttgctgctgatcatgaaccaccacaagacaatgattttgttggtttaggcggttta
tttgatgagcctgagattactgaagggcctgttgtttttggacctccttgtaatcctgaa
gcttcttcgggaggagctggttttatggcgttcagcagcgagtctgatcctgaagaaata
gatgattcggattcacccgtgtctgtagagagatgcttggctcatttcactaagcctgag
attttgtctgacgacaatgcttggaactgcgagaactgttcaaagaacctgaaactccaa
cggttgagggaaaagagaaaatccaagaaagatgaatcgagatcaagcaacaccagcaac
ggatgggtgagtgaaaatgaagatgtttctgctgtgaagcaagatccaagtgatggttct
agtagtgtcaaggataatgaaagagaagctatgagttctaatgacagtgaatccgaaggc
gaagaagattcagagaaagtgataacagtgaaaagagatgcaactaaaagagtacttgtg
aacaaagccccacctgttctaaccatacatctaaagcgattcagccaagacctgcgtggt
aggctaagtaagttaaatggtcatgtttctttcaaagaagtgatcgatcttcgacagtat
atggactcaaggtgtagtggagaagactcgccagtttatagattggctggactggtggag
cattcagggacgatgagaggaggtcactatgtggcgtatgttagaggaggtggtaagaaa
ggtaaagagagtgtgtggtataacataagcgatgcacatgtccgtcaggtttcgttggac
aaggttatgcattcagaagcgtacatcttgttctacgaacggatcttcacacaagactaa
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