KEGG   Brassica rapa (field mustard): 103836999
Entry
103836999         CDS       T03449                                 
Name
(RefSeq) denticleless protein homolog isoform X2
  KO
K11790  denticleless
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103836999
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103836999
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR11_1st Beta-prop_WDR75_2nd TAF1C_beta-prop WD_LRWD1 WD40_RFWD3
Other DBs
NCBI-GeneID: 103836999
NCBI-ProteinID: XP_009111579
LinkDB
Position
A09:2033262..2036889
AA seq 533 aa
MQRTCPSFSLFSDSICGEAPMENSRSRSVFVDIGLRELNGFRVRKRPFFFADSELVCREI
AGVAVEHDGDRTPPLAVSFCKGSRKSQLFAVSDEDGHVSLFNSNHKFDSSATHQENTYNA
RLSDWVAHYNAVFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSH
PTRSDLLVSGSRDGCFALWDFRCKSSSHKEEFCINYTGMVKGAHLSPLSKRIRRSKAASS
SITSVLYLKDEITIATSGAPDSALKFWDTRKLKVPFAQASPQPDSTNTKEKRAHGIVSLS
QDSSGTLLTASCKDNRIYLYNILQLDKGPVQSFSGCRIDSFFVRTMISPDGEYILSGSSD
GNAYIWQVNKPQVDPTILKGHDSEVTAVDWSPSEIGKVATASDDFTVRLWNIENNRCTTA
NASASRVKRRVTALSNTEATKERLEMNREPESPQKHSSDDGDDNNDNQSMPIIRTPETQR
KKTSLSSLSFSASEEDKTCERTPETAVDSPLSVLNPPSSVKRRTIRDYFLVTP
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgcagcgtacgtgtccatcattctctcttttctccgattcgatttgcggagaagctccg
atggaaaactccagatccagatccgtcttcgtcgacatcggactaagagagctcaacgga
tttcgagtaaggaagcggccgttcttcttcgcagattccgagctggtttgcagagagata
gccggcgtagctgtcgaacacgacggcgatcggactcctcccttggccgtttcgttctgt
aagggtagcaggaagtctcagttattcgcggtgtcagatgaggatgggcatgtgagcttg
tttaattcgaatcacaagtttgactcttctgcaactcaccaggagaatacatataatgcc
aggcttagtgactgggttgctcattataatgcggtgtttgacatttcttggatcaaggga
gatagttgtcttctgactgcttctggtgatcaaactattaaagtatgggatgttgaggag
aataaatgtactggagtccttataggacacacaggaactgttaaatcaatgtgctcacat
ccaacacgttctgatcttcttgtctctggctccagagatggatgttttgcgctatgggat
tttagatgcaaaagtagctctcacaaagaggagttttgcatcaactatactggcatggtt
aaaggagctcatctatctcctctttcgaaacgaatcagacgtagcaaggctgcttcatca
agcattacatctgtgctttatctcaaggacgagatcacaattgccacatctggagcacca
gatagcgcattgaaattttgggatacaagaaagctgaaagttccttttgctcaagcatct
ccacagccagactcaacaaacactaaggaaaagagagcacatggtatagtatcattgtcc
caggactcaagtgggaccttactcacagcatcatgcaaggacaacagaatctatctatac
aacatactgcagcttgacaaaggacctgtacaatctttctctggttgcagaatagattct
tttttcgtaaggacaatgattagtcctgatggtgaatacattttaagcggttcaagcgac
ggtaacgcatacatatggcaggtcaataagcctcaagtagatcctacaatcttgaaaggc
catgactctgaagtaaccgcagtagattggtctccgtcagagattgggaaggtagcaaca
gcttcagatgatttcacggtacgactgtggaacatagaaaacaaccgttgcacaaccgca
aacgcatcagcgtcaagagttaaacgcagagtaactgcattgtcaaatactgaagcaacc
aaagagagacttgagatgaacagagaacctgagagtccccaaaagcattcatcagatgat
ggtgatgacaataatgataatcagtcaatgcctatcatcagaactccagagactcagaga
aagaaaacatcgttatcatcattgtcattctcagcctcagaggaagacaaaacatgcgag
agaacaccagaaaccgcggttgacagtccattgtctgtcctaaaccctccttcctctgtc
aaaagacgaaccattagagattattttcttgtcactccctaa

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