Brassica rapa (field mustard): 103837260
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Entry
103837260 CDS
T03449
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103837260
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103837260
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103837260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
Rtf2
Prok-RING_4
zf-Nse
zf-ANAPC11
TerY_C
Motif
Other DBs
NCBI-GeneID:
103837260
NCBI-ProteinID:
XP_009111848
UniProt:
M4F510
LinkDB
All DBs
Position
A09:complement(2610780..2612422)
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AA seq
205 aa
AA seq
DB search
MNTNEWRSTRGIRRRKAVFDLNVALTDLEGTSASVRVSPIVPSCDLQRESEPSHPPPAMI
DVDAIEDDVVESSASAFAEARSKSTGARRRRLMVDVESGGTTRLSPNKRRRVPPNQPVID
CEHVPDDTSSSVCSSKAAPPPPPEEPKFSCPICMCPFTEEMSTKCGHIFCKGCIKMAISR
QNKCPTCRKKVTAKELIRVFLPTTR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacactaatgagtggagatcaactcgagggatcagacggaggaaagctgtgtttgat
cttaatgtggcactcactgatcttgaagggacctccgcttccgtaagagtatctcccatt
gtgcctagctgtgatcttcaaagggagtctgagccttctcaccctcctccggccatgatt
gatgtggatgctattgaagatgatgttgttgaatcatccgcaagtgcttttgctgaggct
agaagtaaatcaacaggtgcacgtcggagacggttaatggttgatgttgagtcaggtggt
acgactagattgtctcccaacaaacggagaagggttcctcctaatcaacctgtcatcgac
tgtgagcatgtccctgatgacacctcgtcgagtgtgtgtagctcaaaggctgcacctcct
cctccaccagaggagccgaaattctcttgtccaatttgtatgtgcccgtttacggaggag
atgtcaacgaaatgcggtcacatcttctgcaagggatgtataaagatggcaatatctcgc
caaaacaagtgccctacttgtaggaaaaaggtgactgcaaaagagctgattcgagtgttc
cttccaaccaccagatga
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integrated database retrieval system
