KEGG   Brassica rapa (field mustard): 103837366
Entry
103837366         CDS       T03449                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103837366
Enzymes [BR:brp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103837366
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103837366
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103837366
NCBI-ProteinID: XP_009111972
UniProt: A0A397XZA0
LinkDB
Position
A09:complement(3941591..3947209)
AA seq 652 aa
MNMPEKPSESNGKVHRKVGLVYDETMCKHDTPDGEAHPERPDRIRVIWEKLQLAGVTQRC
VVLGGTKAEDAHLQLVHTKDHVNLVKSSTNKKDYQSDRVASLVNSIYLNGSTSEAAYLAA
GSVVEVAEKVAKGELDSGFAIVRPPGHHAEADEAMGFCFFNNVAVAASYLLDERPDLGVK
KILVVDWDVHHGNGTQKMFWEDPRVLVFSVHRHEDGGFYPGGDDGSYNMVGEGPGEGFNI
NVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSV
MLKKLMEFAQGKIVMALEGGYNLDSIAKSSLACVQVLLEDNPIQGSSEAIPFMSTWRVIQ
AVRKRLCAYWPSLADELPSKLTNQKTPTPIVLTSNSNSEAKDNAHELLDQMSKLNIENHQ
GDTKVSRSWRSDLSKVDVWYASFGSNMWKPRFLCYIQGGQVEGMTKPCVGSMDKSPPKGI
TWGTYPNRLFFGRESTNVWGKGGVAFTNPLTNPNDQTHMCLYRITLEQFNDVLFQENGLN
VDFASPIFGLTALQLVEKNGSTPLEAALAPWYGNVVCLGREGDVPILTMTCTLSVIEKFA
SGEVPLSPPAKAYANTLIRGLVEGGIFSEEEAEAYIDNAASKPLYINGASRF
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgaacatgcccgagaaaccttccgaatccaatgggaaagtacatcgaaaggtgggtctt
gtttacgacgagaccatgtgcaaacacgacacacctgacggcgaggctcaccctgagcgt
cccgaccgtatcagagtcatctgggagaagcttcagctcgccggagtcactcaaagatgt
gtggttcttggtggtaccaaagcagaagatgcgcatctccaactggttcacacaaaggac
catgttaatctagttaagagtagcacaaacaagaaagattatcagagtgacagggttgct
tcactggtgaattcgatatatcttaatggaagtacatctgaagctgcatatcttgcagct
ggttctgttgtagaggtggctgagaaagttgccaagggagagttagactctggatttgct
attgtcaggcctccagggcaccatgctgaggcagatgaagccatggggttctgttttttc
aacaatgttgcagtcgctgctagttatctactagatgaaagacctgatctaggtgtcaag
aagattctggttgttgattgggatgtccatcacggaaacggcacccagaagatgttctgg
gaagatcctcgtgtactagttttctctgttcataggcatgaggatggaggcttctatcca
gggggtgatgatggatcatataacatggttggtgaaggtccaggtgaagggttcaacata
aacgttccatgggagcaaggaagatgtggagatgcggattatcttgctgcttgggaccat
atcttgattcctgtagctaaggagtttaatcctgatattatcttgttatcagctggcttt
gatgcagctattggtgatccactcggtggttgtcgtgttacaccatatggatactcagtt
atgttgaagaagctgatggagtttgcacaaggaaagattgtgatggcattagagggaggt
tacaatcttgactcaattgcaaagtcttcacttgcttgtgtccaagttttgcttgaagac
aacccaattcaaggttcttctgaagcaattccattcatgtccacatggcgtgtcatacaa
gcggtacgcaagagactatgtgcttattggccttcacttgcagatgaactaccatcgaag
ctgactaatcagaaaactcctactccaattgtccttacctcaaactccaactctgaagcc
aaagacaacgctcatgaactcctggatcaaatgtcaaaactcaacattgaaaaccaccaa
ggagatactaaggtttctagatcttggagaagtgatctttcaaaggttgacgtctggtat
gcctctttcggatccaacatgtggaaaccaaggttcctttgctatattcaagggggacaa
gtggagggaatgacaaagccgtgtgttggttcaatggataaaagtccaccaaagggaata
acgtggggaacatatccaaaccggttattctttggccgtgaatctacaaatgtttggggt
aaaggaggtgttgctttcaccaatccccttactaatcccaatgatcaaactcacatgtgt
ctgtacagaatcactcttgagcagttcaacgatgttctgtttcaggaaaacggcttgaat
gttgattttgcttctccaatctttggccttactgctctgcagttagtagagaagaatgga
tccactccacttgaagctgctttggctccttggtatggtaacgttgtctgcttgggaaga
gaaggcgacgtacctatacttacaatgacttgcacactttctgttattgagaagttcgct
tctggtgaagtgccattaagtcctcctgcaaaagcctatgccaacactttgataagggga
cttgttgaaggaggaatattctctgaagaagaagctgaagcttacattgacaatgctgct
tctaagcctctctatattaatggagcttcacgtttctga

DBGET integrated database retrieval system