Brassica rapa (field mustard): 103837476
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Entry
103837476 CDS
T03449
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103837476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103837476
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103837476
FA (Fanconi anemia) pathway
103837476
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
103837476
NCBI-ProteinID:
XP_009112086
UniProt:
M4F438
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Position
A09:complement(4532057..4537897)
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AA seq
626 aa
AA seq
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MPRRRLRLQHYSSDDDEEEGEDEIGASGIGDSAQSIGRAPSIQPESSSASNLNPNPVEPE
VEIIDVSGNPTPSPPDSSIPVDPSEAEVENGYDSPMAEALSRMGIKLKTEWWVTCLSGLE
VSVPQFSRLEVAAKAKHCFEQFLFCDMNLCGGGVLPRNVASMVLEELPGPFVLQVDEIVN
IGCALKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPVKDLQVLAPAGLKIVVSSVQVR
HGLLMLVPETIQVLGGMVEELEEARKRLVIEVNKPPRGIRTRNRGVASLATRASLAAWSL
NDNDTGNQVNSYTSGDASHVQANGQGNSVNVTRTHISPRTMSNPPASTNVEAAVSRVEHM
QIDTAATHGERTFSGLHSTSSNIHMTASTPRTSCSGTRPFYNSGCENTLDQQTSNVTSFV
EEMHIDNGSERDTTSPVYGSGSGAVADDEVSNMVVDLETPSVMSTNPETPFTYLAEMSQN
WAVMKDTMPFVQGRIKCFLTGVKRFQFKQQSTFELICYVDDGSLICEILLHNDVVQRRIG
HSSMEVTAALSSSAPTKENAMMKEKLKGFQLFLADFEGMMVVEMNRTSQYPVAIEMNQGC
SSTDARLLFERIKSSGIAPPVVVLSP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcctagacgacggctgagactccagcactactcctccgacgacgacgaagaagaagga
gaagatgaaattggagcaagcggaatcggcgattctgctcagagcattggtcgtgctcct
tctattcaaccggaaagctcatcagcgtctaatttaaaccctaaccccgtcgagccggaa
gttgagattatcgacgtatccggtaatcccactccctcgccgccggattccagtattccg
gtcgatccgtcggaggcagaagtcgagaacggctacgactcgccgatggctgaggctctc
tctcgaatggggattaagctcaagacggagtggtgggtcacttgtctttctgggctcgaa
gtctccgttccgcagttctctcgcctcgaagttgcggcgaaagctaagcattgcttcgag
cagtttctgttttgcgatatgaatctatgcggaggtggggtgcttcctcggaacgttgcg
tctatggttcttgaagaactccctggtccgtttgttcttcaggttgatgagattgttaac
attgggtgtgccctcaaagggaggtatgagaacgctaatgcagggcttaagaggtgtttg
aagctgtctatgactgatggtgttcaacgtgtttttggtatggagtacagacctgttaaa
gatctgcaagtcttggctcctgctggtttaaagattgttgtgtctagcgtacaagttaga
catgggcttttaatgctagtacctgagactatacaagttttaggagggatggttgaagaa
ttggaagaagcgcgaaagcgtctggttattgaagtgaacaaacctccaagaggaataaga
acaaggaaccgaggggttgcttcgttggcaaccagagcaagtctagctgcgtggtcgcta
aatgacaatgatactggtaaccaagtaaacagttatacctcgggagatgctagtcacgtt
caggccaatggtcaaggcaattctgtgaatgtaacgagaactcatatcagtccacggaca
atgagtaatcctcctgcttccaccaatgtggaagctgctgtttcgagggttgaacatatg
cagattgatactgctgctacccacggggaaagaacgttctctggtttgcactcgacttct
agtaacattcacatgacagcttccacacctcgtactagctgtagtggtacaagacccttt
tacaacagcggttgcgaaaataccttggatcaacaaacatctaacgtgacttcattcgtc
gaagaaatgcatatcgacaatggtagtgaaagggatacaacgagtccggtatatggttca
ggttcaggcgctgtagctgatgatgaagtcagtaatatggttgtcgatttggaaaccccc
tctgtgatgtctacaaatccggagacacctttcacttacttggccgagatgtctcagaat
tgggcagtaatgaaagataccatgccttttgttcaaggaaggattaagtgctttctaact
ggagtgaagagattccagttcaagcaacagtctacttttgagcttatatgctacgtcgat
gatggtagtctcatctgtgagatcttgctccataatgacgttgtacaaagaaggataggt
cattcatccatggaggtcacagctgcactctcctcttcagcaccaacaaaagaaaatgcc
atgatgaaggagaaactaaaaggcttccagttgtttctagctgactttgagggaatgatg
gtggtagaaatgaacagaacgtcgcaatatccagtagctattgagatgaatcagggatgt
tcatcaaccgatgctcggttactatttgaaagaatcaaatcttctggcatagctcctcca
gttgttgttttatccccttga
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