KEGG   Brassica rapa (field mustard): 103837855
Entry
103837855         CDS       T03449                                 
Name
(RefSeq) autophagy-related protein 13b
  KO
K08331  autophagy-related protein 13
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:brp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    103837855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103837855
   03029 Mitochondrial biogenesis [BR:brp03029]
    103837855
Membrane trafficking [BR:brp04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    103837855
   Atg1 complex
    103837855
Mitochondrial biogenesis [BR:brp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    103837855
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 103837855
NCBI-ProteinID: XP_009112490
UniProt: M4F901
LinkDB
Position
A01:23454729..23458723
AA seq 590 aa
MNRSSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMICSPSPSSSSSSSS
SVRPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVARQPFQMSLSDQDELACET
KNEQVIERWLVQYDNRKGREAAASRSSSSNSKLQVMYKKATLLLRSLFVMVRLLPAYKIF
RELNSSGQICKFKLVPKVPTIVEPFTRREEAEMQKFAFAPVDTVCGRLCMSVMYRSLSDV
SCEHSAPVSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLAFQRRHSWSFDRFKASSPP
PSVSCSPSPTRSDSQALVRRLPDIPTGRRKDEERDFSPPCSPSGPVSRGITRTESAPVRI
PAPSFESKQNLVAPSPRLKLLRQASLKPVRNSGGAVESGAGLEKLFLYGREDFRRSSGVR
LSTNSSPRISFSRSSSRSYQEDFDDNDFPCPFDVEYDEITDPSSRPGSFDQRGDIHEPPL
ESSGSYPKKSQDAAVGTLVNMLKKAPPLRQDVSESSIPEIYWNNNNKKPAGAHEVAAASM
TASGIALAAKTTADALEELRSYKEMKNVLLSQSTMGSSSVTTSPFAVSGS
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgaacaggagtagcagcaattcagaaggtgctaaagcagagcagatcatattcgagttc
ttcgccaaaagcctccacatcatcctcgaatcaaggactcctttcatgtcttcccgaaac
ttcagcggcgaccagatgatctgctccccttccccttcctcctcctcctcatcttcctct
agcgtcaggccccgcgacaaatggttcaacctagccctcagagaatgccctgcagcctta
gagagtttcgacatcggccgcagaagcagcctcgagcctctggtcgtcgatgtagttctt
gtagcgagacaaccatttcagatgagtttgtcagatcaagatgagttagcgtgtgagaca
aagaacgagcaagttatagagaggtggttggtgcagtacgataacagaaagggtagggaa
gctgctgcttccaggtcgagtagtagtaacagtaagctgcaagtgatgtataagaaagcg
actttgctgctgagatcactctttgtgatggttaggcttttgcctgcttacaagatcttc
cgggaactcaactcctccggacagatctgcaagtttaagctcgtccctaaggtccccacc
attgtcgagccgttcactcggagagaagaggcggagatgcagaagttcgcttttgctccg
gttgacaccgtctgcggtaggctttgcatgtcggtgatgtatcgctctctctctgacgtg
agctgtgaacactcggctcctgtctctccgacgtttataacggactacgttgggagtcct
ttggctgatccgttgaagaggttcccttctctgcctctctcttacggttcgcctccgttg
ctggcgtttcagaggcggcatagctggagtttcgataggttcaaggcctcctctcctccg
ccttcggtttcttgctcgccgtctcctacgcggtcggattcgcaggcgttggttcgtcgt
cttcctgatatacctactggtcgtaggaaggatgaagagagagacttctcccctccttgc
tctccttcaggacctgtctcgagaggcatcacgcgtactgagagtgctcctgttagaatc
ccggctcctagttttgagtccaagcaaaacttggtggcgccttctcctcgtttgaaactg
ttgagacaggcttctttgaagcctgtgaggaacagtggtggtgctgttgaatctggagca
gggttggagaagctgtttctttatgggagagaagactttaggaggagctctggagtgagg
ctgtctaccaacagctcaccgaggatatcgttttctcgaagttcgagtagatcataccaa
gaagattttgatgataatgacttcccttgcccgtttgatgttgagtatgacgagattact
gatcctagcagcagaccagggtctttcgaccagagaggagatatacatgaaccaccactt
gagtcaagcggctcctacccaaagaagtcacaagatgctgcagttggtactcttgtgaat
atgctgaagaaagctccgcctctcagacaagacgtctctgaatcttccatacctgagatt
tactggaacaacaacaacaagaaacctgcaggggctcacgaggtggcagcggcgtctatg
acagcgtcggggattgctctggcggcgaagacaacagcggatgcgttggaagagttgagg
tcgtacaaggaaatgaagaatgtgttgcttagccaatccacaatgggttcttcctcagtt
actacttcaccctttgctgtatcaggatcttga

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