Brassica rapa (field mustard): 103837855
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Entry
103837855 CDS
T03449
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103837855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103837855
03029 Mitochondrial biogenesis [BR:
brp03029
]
103837855
Membrane trafficking [BR:
brp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103837855
Atg1 complex
103837855
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103837855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103837855
NCBI-ProteinID:
XP_009112490
UniProt:
M4F901
LinkDB
All DBs
Position
A01:23454729..23458723
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AA seq
590 aa
AA seq
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MNRSSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMICSPSPSSSSSSSS
SVRPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVARQPFQMSLSDQDELACET
KNEQVIERWLVQYDNRKGREAAASRSSSSNSKLQVMYKKATLLLRSLFVMVRLLPAYKIF
RELNSSGQICKFKLVPKVPTIVEPFTRREEAEMQKFAFAPVDTVCGRLCMSVMYRSLSDV
SCEHSAPVSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLAFQRRHSWSFDRFKASSPP
PSVSCSPSPTRSDSQALVRRLPDIPTGRRKDEERDFSPPCSPSGPVSRGITRTESAPVRI
PAPSFESKQNLVAPSPRLKLLRQASLKPVRNSGGAVESGAGLEKLFLYGREDFRRSSGVR
LSTNSSPRISFSRSSSRSYQEDFDDNDFPCPFDVEYDEITDPSSRPGSFDQRGDIHEPPL
ESSGSYPKKSQDAAVGTLVNMLKKAPPLRQDVSESSIPEIYWNNNNKKPAGAHEVAAASM
TASGIALAAKTTADALEELRSYKEMKNVLLSQSTMGSSSVTTSPFAVSGS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagtagcagcaattcagaaggtgctaaagcagagcagatcatattcgagttc
ttcgccaaaagcctccacatcatcctcgaatcaaggactcctttcatgtcttcccgaaac
ttcagcggcgaccagatgatctgctccccttccccttcctcctcctcctcatcttcctct
agcgtcaggccccgcgacaaatggttcaacctagccctcagagaatgccctgcagcctta
gagagtttcgacatcggccgcagaagcagcctcgagcctctggtcgtcgatgtagttctt
gtagcgagacaaccatttcagatgagtttgtcagatcaagatgagttagcgtgtgagaca
aagaacgagcaagttatagagaggtggttggtgcagtacgataacagaaagggtagggaa
gctgctgcttccaggtcgagtagtagtaacagtaagctgcaagtgatgtataagaaagcg
actttgctgctgagatcactctttgtgatggttaggcttttgcctgcttacaagatcttc
cgggaactcaactcctccggacagatctgcaagtttaagctcgtccctaaggtccccacc
attgtcgagccgttcactcggagagaagaggcggagatgcagaagttcgcttttgctccg
gttgacaccgtctgcggtaggctttgcatgtcggtgatgtatcgctctctctctgacgtg
agctgtgaacactcggctcctgtctctccgacgtttataacggactacgttgggagtcct
ttggctgatccgttgaagaggttcccttctctgcctctctcttacggttcgcctccgttg
ctggcgtttcagaggcggcatagctggagtttcgataggttcaaggcctcctctcctccg
ccttcggtttcttgctcgccgtctcctacgcggtcggattcgcaggcgttggttcgtcgt
cttcctgatatacctactggtcgtaggaaggatgaagagagagacttctcccctccttgc
tctccttcaggacctgtctcgagaggcatcacgcgtactgagagtgctcctgttagaatc
ccggctcctagttttgagtccaagcaaaacttggtggcgccttctcctcgtttgaaactg
ttgagacaggcttctttgaagcctgtgaggaacagtggtggtgctgttgaatctggagca
gggttggagaagctgtttctttatgggagagaagactttaggaggagctctggagtgagg
ctgtctaccaacagctcaccgaggatatcgttttctcgaagttcgagtagatcataccaa
gaagattttgatgataatgacttcccttgcccgtttgatgttgagtatgacgagattact
gatcctagcagcagaccagggtctttcgaccagagaggagatatacatgaaccaccactt
gagtcaagcggctcctacccaaagaagtcacaagatgctgcagttggtactcttgtgaat
atgctgaagaaagctccgcctctcagacaagacgtctctgaatcttccatacctgagatt
tactggaacaacaacaacaagaaacctgcaggggctcacgaggtggcagcggcgtctatg
acagcgtcggggattgctctggcggcgaagacaacagcggatgcgttggaagagttgagg
tcgtacaaggaaatgaagaatgtgttgcttagccaatccacaatgggttcttcctcagtt
actacttcaccctttgctgtatcaggatcttga
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