Brassica rapa (field mustard): 103837914
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Entry
103837914 CDS
T03449
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 4
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00900
Terpenoid backbone biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103837914
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
brp01006
]
103837914
Enzymes [BR:
brp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103837914
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103837914
2.5.1.29 geranylgeranyl diphosphate synthase
103837914
Prenyltransferases [BR:
brp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103837914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
103837914
NCBI-ProteinID:
XP_009112555
UniProt:
M4FBS8
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All DBs
Position
A09:complement(6704367..6706337)
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AA seq
394 aa
AA seq
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MLVLQDQIGYYKEQEPTKIIQTSHIHQMEAQTIILYLLLFFLSLNFVFQTLKQRLSPANT
RRLTRFLHLPFKHPAVFARQDVHEFLDSSTQVENNEDDSEFDFKPYMKTKAESINRALDK
AIPLVEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERSAVPAACAVEMIHTMSLI
KDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSPERMVRAVREL
AKSIGTKGLVAGQAMDLSSEGLDQNDVGLEELEFIHVHKTGSLLEASAVIGAVIGGGSEE
EVEKVRRFARCVGLLFQVVDDILDGTKSSEELGKTAGKDQVAGKLTYPKVLGVEKSKEFV
KRLKKDAREHLKGFDSDKAKPLVALADFIANRDN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgcttcaagaccagataggttattataaagaacaagaaccaacaaagatcatt
caaacatcacacattcatcaaatggaagctcaaactatcattctctatctcttactcttc
ttcctatctctaaacttcgtgtttcaaactctaaaacaacggctgagtccggcaaataca
cgacggctaacccgtttcctccacctcccgttcaagcatcccgccgttttcgccagacag
gatgtccatgagtttcttgattcctcaacccaagtagagaacaacgaagacgattccgag
ttcgacttcaaaccttacatgaaaaccaaagccgagtcaataaacagagcgctagacaaa
gccatcccactggtggagcctctcaacatccacaaggcaatgcgctacgccatcctcgcc
ggcggcaaacgcgtcagaccaatactctgcctcgcggcctgcgagctagtcggaggggaa
gagcgttcggcggttccggcggcgtgcgcggtcgagatgattcacacaatgtcactcatc
aaagacgatctcccttgcatggacaacgacgacctccggcgagggaagcccacgacgcac
aaagtcttcggagaaagcgtcgcgattctctccggcggcgcgctcctagctctggccttc
gagcatttgacggaagctgacgtgtcgcctgagagaatggttagggcggttagagagctg
gcgaagtctatagggacgaaagggctcgtggcgggacaagcgatggatttgagcagcgaa
gggttggatcaaaacgacgtcgggttggaggagcttgagtttattcacgttcataaaacc
ggttcgttgcttgaggcatcggcggttatcggagcggttattggaggtggttcggaggaa
gaggttgagaaggtgaggaggttcgcgaggtgtgttgggttgttgtttcaggtggttgat
gatattttggatgggactaagtcgtcggaggagctggggaagaccgccgggaaagatcag
gtggccggaaagctgacgtatccgaaagtgttgggagttgagaaaagtaaagagtttgtt
aagaggttgaagaaagatgcgagggaacatcttaaagggtttgattcggacaaagcgaaa
cctttggtagctcttgctgacttcattgccaacagagataactga
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