KEGG   Brassica rapa (field mustard): 103837926
Entry
103837926         CDS       T03449                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103837926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103837926
   03036 Chromosome and associated proteins [BR:brp03036]
    103837926
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103837926
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103837926
   PBAF complex
    103837926
   GBAF(ncBAF) complex
    103837926
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding ZZ Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 103837926
NCBI-ProteinID: XP_009112598
UniProt: M4D4X6
LinkDB
Position
A01:complement(1876240..1880104)
AA seq 932 aa
MEERRRDAGGTLASAGSSGDSPASEPTPRRRVKRKSNALGASNSSSTSSKRMLTREKAML
ASFSPVHNGPLTRARQAPSNMPSATEAKPELLSAPDGEKPKEEEERNKAIREWEALEAKI
EADFEGIRSRGSNVHVVPNHCGWFSWGKIHPLEERSLPSFFNGKLEGRSSDVYIEIRDWI
MRKFHSDPNTQIEGKHLTELEVGDVEAKQEVMEFLDYWGLINFHPFPPPDASSSDGGERD
DGVGDKESLLNSLYRFQADEASSMAAFVQKPRLTAQATTTPSGLFPDPMAAADDSLKQEG
PAVEYHCNSCSADCSLKRYHCPKQADFDLCMECFDSGKFSSDMSSSDFILLEPAKDPGVG
SGKWTDQETLLLLEGIEIFKENWSEIAEHVATKTKAQCMLHFLQMPIEDAFLDQTDHKDP
SIKDTTDIAVSKDEKPVLNDAPVEKEKETENTNLVVEVEAVKEAPEKEDDNEGKVPQESS
KPGDASEETKEVEADQKTPEVEIVIDERCKDEADENVALKALTEAFEDVGYPITPEASLS
FADLGNPVMGLAAFLVRLAGSDVATASARASVKSLNSNSGLLLATRHCFVLEDPPENKED
LTESKSVDAEEKSQKAEDDREMTDSDPGKVNQDSVSEGKQPGSLTESYARNPDSEGQKVS
INAAATKNSEKPADIICKLQDKSSGKELEKPSKDGDKLSSENKAASKATVSKAAADVSQP
EASKDVEMKDTLQSEKDPQDMVKTAGEKAEQAKEDDHSMPDTSVAEQPIGSASLPENGTG
ENLNKEGSKEKNVCAGKKDKHNSGKLKRAAISALSAAAVKAKHLAKLEEDQIRQLSGSLI
EKQLHKLEAKLSIFNDAESLTARVREQLERSRQRLYHERAQIIAARLGVPPSVSSKASLP
ANRIATNFANVAHRPPIGMAFPRPPMPRPPGP
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggaggagagacgacgcgatgctggaggaaccctagcttcggccggcagctccggagac
tctccggcatccgagcccacgccgcggcggcgcgtgaaaagaaaatcgaacgctctcgga
gcctccaattcctcatcaacatcctccaagcggatgctgacgcgcgagaaggcgatgctc
gcgtccttctccccggtccacaacggacctctaaccagagctcgacaggcgccgagcaac
atgccgtccgcgaccgaggcgaagccggagctgctgagtgccccggacggcgagaagccg
aaggaggaggaggagaggaacaaggcgatccgcgagtgggaggccttggaggctaagatc
gaagctgatttcgaagggattagatctcgcggaagcaatgttcatgtggtgcctaatcat
tgcggttggttctcatggggaaagattcatccgcttgaagagcgttcgttaccttctttc
ttcaacggcaagttagaaggtcgcagttccgatgtttacattgaaattagggattggatc
atgaggaagtttcattccgatccaaacacgcaaatagaaggaaaacatttaacagaactc
gaggttggagacgttgaagcaaagcaggaggtgatggagttcttggactactgggggtta
atcaattttcacccgttcccaccaccagacgcgagttctagtgatggtggtgagcgtgat
gatggtgttggggataaggagtctttgctcaacagtttatatcgattccaagcggatgag
gcttcttcgatggctgcttttgttcaaaagcctcgtctcacagcgcaagctactactaca
ccatcagggctgtttccggatccgatggctgctgctgatgactcgctgaagcaagagggt
ccagcggttgaatatcactgtaactcttgttcagctgattgctctctcaagcgctaccac
tgcccgaaacaggcagattttgacttatgcatggagtgctttgacagtggcaagttcagc
tcagatatgtcatcttccgactttatactattggagcctgctaaggatcctggcgttggt
agtgggaagtggactgatcaagagactcttcttctactcgaaggtatagagatctttaag
gagaattggagtgagattgcggagcatgttgctacgaagacgaaagctcagtgtatgctt
cattttcttcaaatgccaatcgaggatgcgtttcttgatcaaactgaccacaaagatccg
agtataaaagacactacggatatagctgtgtctaaagatgagaaacctgttctaaacgat
gcacctgtagagaaagagaaagagacagagaatacgaatcttgttgttgaagttgaagct
gtgaaggaagctccagaaaaagaagatgacaatgaaggaaaagttcctcaggaatcttct
aagcctggagatgcgagtgaggaaactaaggaagtggaagccgaccagaaaacgcctgag
gtagaaatcgtcattgatgaaagatgtaaagatgaggctgatgagaacgttgctctgaaa
gctctgactgaagcttttgaagacgttggttatcccatcacacccgaagcttctttatcc
tttgctgatttgggaaatcctgtcatgggactggcagcttttctggtgagattggcggga
tctgacgttgctactgcttcagccagagcttccgtcaaatctcttaacagcaattctggg
ttgttgcttgccacaagacattgttttgttctcgaagatccaccagaaaacaaggaggac
ttaactgaatcaaaaagtgtggatgcagaagagaaaagccagaaagcagaagatgatagg
gaaatgacagatagtgatccaggcaaagtaaatcaggattcagtctctgaaggaaagcaa
cctggttccctaactgaaagttatgctagaaatccagattctgaaggacaaaaagtatct
attaatgcagccgcaactaaaaattcagagaaaccagcggatattatttgtaaattgcag
gacaaaagttcagggaaggagctcgaaaaaccttcaaaggatggtgataagctttctagc
gaaaataaagcggcctctaaagcaactgtctccaaggcagctgcagatgtttctcagcca
gaagcatcaaaagatgtggagatgaaggatacattacagtccgagaaggatcctcaagat
atggtgaaaacagcaggagaaaaggctgaacaggctaaggaggatgaccacagtatgcca
gacacgtctgttgcagagcagcccattggatcagcttctctaccggaaaatggaacaggt
gaaaatctaaataaagaaggaagtaaagagaagaatgtttgtgcagggaaaaaagacaaa
cataactctggtaagcttaagcgcgcagctatctctgctctctcagctgcggcagtaaag
gcaaagcatcttgcgaagctcgaagaagatcaaatccgacaactttctggatcattaata
gagaagcagttacataaactagaagcaaaactatctatcttcaacgacgctgaaagcttg
acagcgagggtaagagagcaattagagaggtcgaggcaacggctataccatgaaagagca
cagatcatagcggctcgactgggtgtcccgccttcagtgtcctcaaaagcatcattacca
gcaaacagaatcgctacaaattttgctaatgtggctcatagacctcccataggcatggcc
tttccacgcccaccaatgccaagacctccaggtccatga

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