Brassica rapa (field mustard): 103838171
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Entry
103838171 CDS
T03449
Name
(RefSeq) ABC transporter F family member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
brp03012
]
103838171
Translation factors [BR:
brp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103838171
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
PWI_ABCF3
AAA_21
SMC_N
AAA_15
ORC-CDC6-like
AAA_29
DUF5906
AAA_16
RsgA_GTPase
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
103838171
NCBI-ProteinID:
XP_009112839
UniProt:
A0A397Y1V0
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Position
A09:complement(8328214..8332507)
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AA seq
717 aa
AA seq
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MTEVASSVVYEVLGSRAKDVDEPIMEYIINVLADEDFDFGEEGEGAVDAVGDLLVAAECV
SDFDECRLVCSKLADKFGKHGLMKPTPTVRSLAMPVRMNDGMDDGPVKKKKPEPTDGPLL
SERDKAKIERRKKKDDRQREVQYQQHVAEMEAVKAGMPTVSVNHDTGGGSTVRDIHMDNF
NVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIAGIPANCQILHVEQE
VVGDNTTALQCVLNTDIERAKLLEEETQILAKQRDLEVEEPTAKDGVPTKDTAEGDLMSQ
RLEEIYKRLDAIDAYTAEARAASILAGLSFTPEMQKKSTNTFSGGWRMRIALARALFIEP
DLLLLDEPTNHLDLHAVLWLETYLTKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLSTYK
GNYDTFERTRDENVKNQQKAFESSERSRAHMQAFIDKFRFNAKRASLVQSRIKAIDRLAH
VDQVINDPDYKFEFPTPDDKPGPPIISFSDASFGYPGGPLLFRNLNFGIDLDSRIAMVGA
NGIGKSTILKLISGELQPSSGTVFRSAKVRVAVFSQHHVDGLDLSSNPLLYMMRCYPGVP
EQKLRSHLGSLGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLLDEPSNHLDLDAV
EALIQGLVLFQGGICMVSHDEHLISGSVDELWVVSDGRIAPFHGTFHDYKKLLQSSS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagttgcgagctcggtggtgtatgaagtgctgggaagcagagcgaaggatgtg
gacgagccaatcatggagtacatcatcaatgtcctggccgacgaggatttcgacttcggc
gaggaaggtgagggtgccgttgatgccgtcggtgacctcctcgtcgctgctgaatgcgtc
tccgatttcgacgagtgccgattggtttgtagcaaacttgcggataagtttgggaagcat
ggattgatgaagcctacaccaactgttaggagtctcgccatgcctgtgcggatgaacgat
ggcatggacgacggtcctgttaagaagaagaagcctgagcccactgatggtcctttgctc
tctgagcgtgacaaagctaagatcgagaggagaaagaagaaggatgatcgccaaagagaa
gttcaatatcaacagcatgttgctgaaatggaagctgttaaagcagggatgcctactgtt
agtgttaatcatgacactggtggtggctctactgtcagagatatccatatggataacttc
aatgtctctgttggtggccgtgatctcattgtcgacggatctatcaccctctcttttgga
cgccactatggccttgttggacgtaatggtaccggaaaaacaacctttttgaggtatatg
gctatgcatgccatcgcgggtattcctgctaactgccagattttgcatgtcgagcaagaa
gttgttggtgacaacaccacagccttgcaatgtgttcttaacactgatattgaaagagcc
aagctgttggaagaagaaactcaaatactcgctaagcagagggacctggaggtggaagaa
cccacagctaaggatggagtccctaccaaagatacagctgaaggagatcttatgtctcaa
aggcttgaagaaatatacaaacggctcgatgcaattgatgcttatactgctgaggctcgg
gcagctagtatccttgctgggctcagtttcactccagaaatgcagaagaaatctacaaat
accttttcaggaggttggaggatgcgaattgcgcttgctcgtgctctattcatagagcct
gatttgttgttgcttgatgaacctacgaaccatcttgatctccatgctgtcttgtggttg
gaaacatatctaacgaagtggcctaaaacatttatcgtcgtttcacatgctagggaattc
ttgaacacggtggtcacggacatcatccatttgcaaaaccaaaaacttagtacctataag
ggaaactatgatactttcgaaagaacacgggacgaaaatgtgaagaatcagcaaaaagct
tttgaatcaagtgaacgttcacgggcacatatgcaggcgttcattgataaatttcgtttt
aatgcgaagagggcgtcacttgttcagtcaagaatcaaggcaattgaccggctggcccat
gtggatcaagttattaatgatcctgactacaaatttgaattcccaactcctgacgataag
cctggaccccctattatcagtttcagtgatgcatcatttggctaccctggtggtccgttg
ttgtttaggaacctgaatttcggaatagatctggatagccgtattgcaatggtgggagcg
aatggtatcggtaaatcaactattctcaaacttatttctggggaactgcagccaagctct
ggaacagttttccgttctgctaaggttagagttgcagtctttagtcagcaccatgtggat
gggctagacctttcttcgaatcctcttctatatatgatgcgctgctaccctggagtaccg
gaacaaaagctgagaagtcatctgggttctcttggggtcactggaaatctggcacttcag
ccaatgtacactttatcaggtggtcagaaaagcagagtggcatttgccaagatcacattc
aagaaaccgcacttgctattgcttgatgagccctccaatcatcttgatctggatgctgtg
gaagctttgattcaaggacttgtcctattccaaggcggtatttgcatggtgagtcacgac
gagcatctgatttcgggaagcgtggatgagctgtgggttgtgtcagacggcaggattgca
ccattccatggaaccttccatgactacaagaaacttctccaatcttcttcttaa
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