Brassica rapa (field mustard): 103838805
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Entry
103838805 CDS
T03449
Symbol
CRY1
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103838805 (CRY1)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
103838805
NCBI-ProteinID:
NP_001288891
UniProt:
Q0GKU4
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Position
A09:21064450..21067483
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AA seq
704 aa
AA seq
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MSNSCSGGGGCSIVWFRRDLRVEDNPALAAAVRAGPVIAVFVWAPEEEGHYQPGRVSRWW
LKNSLAQLDSSLRSLGTCLITKRSTDSVASLLEVVKSTGASQIFFNHLYDPLSLVRDHRA
KDALTAEGIAVKSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKI
ISGLLLHHTLSEIVSYPLLITLFVLAGDVSKCVADTLIFEDESEKGSNALLARAWSPGWS
NADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLLRIKQVAWANE
GNQAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGR
TGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDAL
GWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESV
LQAAGIELGSNYPRPIVGLDEAKARLHEALSQMWQLEAASRAAIENGSEEGLGDSTEFVE
APIEFPRDITMEETEPTRLNPVRRYEDQMVPSITTSLIRPEEDQESSLSLRNSGGDSRAE
VPRNMVNTNQARQQEARADPVSNQVTAMIPEFNIRIVAENTEESTAESSSSGRRERDGGI
VPEWSGYSEQFASEENGIGGGSTTSTYLQNHHEIVNWRRLSQTG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattcatgttcaggtggtggtgggtgtagtattgtatggtttagaagagatcta
agagttgaagataatccagctttagctgcagctgtaagagctggaccagtaattgctgtg
tttgtatgggcaccagaggaagaagggcactatcagcctggtagggtttcaaggtggtgg
ctcaagaacagtttggctcagctcgattcgtctcttagaagccttggtacttgtctcatc
accaagagatctactgatagtgttgcttctcttcttgaagttgttaaatccactggtgct
tctcagatcttcttcaaccatttgtatgatcccttatcgttggtccgtgatcatcgtgcc
aaggacgctctgacagcggaagggatagcggttaaatcattcaacgcagatttgctttac
gagccatgggaagtgactgatgaattaggccgtcctttctcaatgtttgctgccttttgg
gaaagatgccttagcatgccttatgaccctgagtctcctcttctcccacccaagaagatc
atttctggtttgcttctccaccacacactatctgaaattgtatcttatccacttttgata
actctttttgtgttagcaggcgatgtgtccaagtgtgttgcggatacattgatcttcgaa
gatgaatcagagaaaggaagcaatgcacttctagctcgtgcgtggtctccgggttggagt
aatgctgataaggctctcacaaccttcataaacggaccactgatcgaatactccaagaac
cgcaggaaagctgacagtgccacaacctcgttcctttctccacacttgcactttggggaa
gtgagtgtgagaaaggttttccatcttcttcggatcaaacaggttgcatgggcaaacgaa
ggaaaccaagccggggaagagagcgtgaatcttttcctcaaatctatcggtctcagggaa
tactctaggtacataagcttcaaccatccctactctcacgaaagaccacttctcggccat
cttaagttcttcccttgggctgtggacgagaactatttcaaggcctggaggcaaggccgg
accggatatcccctggtcgatgccgggatgagagagttatgggctactggttggttgcac
gatcgcattagagttgttgtttcaagcttctttgtcaaagtgcttcagttgccatggaga
tgggggatgaagtatttctgggacacacttcttgatgcagatttagagagtgatgctctc
ggttggcaatacatcaccggcaccctcccggatagccgggagtttgatcgcatagataac
cctcagtttgaaggatacaagttcgatccaaacggcgaatacgtaaggaggtggcttcca
gaactttcaagactccccaccgagtggatacatcatccatggaacgcacctgaatctgtg
cttcaagctgctggtattgagcttggatcaaactaccctcgaccaattgttggactagat
gaagcaaaagcacgccttcatgaggccctctcgcagatgtggcaactagaagctgcctca
agagctgcaatagagaacggatccgaagaaggacttggcgattctaccgagtttgttgaa
gctcctatcgagttccctagagacatcacgatggaagagactgaaccaaccagactcaac
cctgtcaggagatatgaggatcagatggttccaagcattaccacttccttgatcagacct
gaagaagaccaagagtcgtctctgagtttgagaaactctggaggagatagcagagcagag
gttccgaggaacatggtcaacaccaaccaagctcggcagcaggaggcaagagcagacccg
gtttcaaaccaagtcactgctatgattccagaattcaatattagaattgttgcagaaaac
actgaagagtcgacagcagaatcttccagcagcggaagaagagagagggacggaggcatt
gtccccgagtggtcagggtactcggaacagtttgctagtgaagagaatgggattggagga
ggaagtacaacatctacctacttgcagaaccaccatgaaatagttaactggagacggctt
tcacaaaccgggtaa
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