Brassica rapa (field mustard): 103838947
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Entry
103838947 CDS
T03449
Name
(RefSeq) syntaxin-61 isoform X1
KO
K08500
syntaxin of plants SYP6
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103838947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103838947
Membrane trafficking [BR:
brp04131
]
SNARE
SNAP-25[C] (Qc)
STX6
103838947
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
DUF3394
PDCD10_N
YqbF_HeH
CCDC-167
Motif
Other DBs
NCBI-GeneID:
103838947
NCBI-ProteinID:
XP_009113652
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Position
A09:complement(28553631..28556000)
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AA seq
282 aa
AA seq
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MRFRETNLTPELVYFTAVRSSSSLFTATPSACRDFVGMSSAQDPFYIVKEEIQDSIDKLQ
SAFHKWERISPGMGDQVHATKELLANCGSIEWQVDELEKAITVAAKDPALYGIDEAELER
RRRWTSNARTQVRNVKTGVLAGKGNAGVGNASEVRLELMRMPNSSEANRYDQYGGRDDDG
FVQSESDRQMLLIKQQDEELDELSKSVERIGGVGLTIHDELVAQERIIDELGTEMDSTKN
RLDFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFVLVFLT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagagagacaaatctcacgccggaactcgtttacttcaccgccgttcgctct
tcttcctctctcttcaccgcaacgccttccgcctgtagggattttgtggggatgtcttca
gcgcaagatccattctacattgttaaagaagagatccaagattctattgataagttgcag
tcagcattccacaaatgggagcgtatctctccaggcatgggggatcaagtgcatgccacc
aaagagcttcttgctaactgtggaagcatcgagtggcaggtagatgagctggaaaaagcg
attaccgttgcagcaaaagatcctgccttgtatggcattgatgaggctgagcttgaacga
cgcaggagatggactagtaatgctaggacacaggtgcggaatgtgaagactggtgttcta
gctggtaagggtaatgctggagttggtaatgcaagtgaagtgcgcctagaacttatgaga
atgccaaactcgagtgaagcaaatagatacgatcagtatggagggagagacgatgatggt
tttgtacaatcagaatcagataggcagatgctgttgataaagcaacaagacgaggaattg
gatgagctgagtaaaagtgtagagagaattggaggggtgggacttactatacatgatgaa
cttgttgcacaggagagaataatagatgaattgggtacagagatggacagtacaaagaac
aggctcgactttgttcagaaaaaagtgggaatggtaatgaagaaagcaggagcgaaaggg
cagatgatgatgatatgtttcttgctcgtcttgttcatcatcctattcgttcttgtcttc
ttgacctaa
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