Brassica rapa (field mustard): 103839073
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Entry
103839073 CDS
T03449
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103839073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103839073
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103839073
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Paralog
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Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103839073
NCBI-ProteinID:
XP_009113822
UniProt:
A0A3P5ZLI5
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Position
A01:23951691..23955471
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AA seq
760 aa
AA seq
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MASPKENDDVPMLPISDTSRTRPFTSRSRSVSLSNTCSTIDGFDSSTVVLGYTGPLRAQR
RPPLVQMSGPLSSTRTPEPLFLLPPPSDSVGISSSQPERYPSFATLEHKKSDDEFVLKHA
NLLRSGQLGMCNDPYCTTCPSYYNRKAAQIPSSRVSAFFDSKFHNALYDDAKGWARRFAT
TANRYLPGIMNPHSKFVQSWTKFFALSCLLAIFIDPLFFFLILVKQNDKCIVIDWPMAKA
FVAVRSVTDILFSVNILLQFRLAYVAPESTVVGAGQLVAHPRKIARHYFRGKFLLDLFIV
MPLPQILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPLLAGQTPTGFIFESA
WANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRDACGNSDHECRNLIDCGRGESSEAF
AAWKGNASASACFQEGGFPYGIYMKAVNLTNHTSLFTRYSYSLFWGFQQISTLAGNQVPS
YFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGRRNLEMTLRRRDVEQWMSHRRLPEG
IRKRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHLFIFLKKVRIFSLMDESILDA
IRERLKQRTYISSSTVLHRGGLVEKMVFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWC
LERSSVNPDGTRIRIPSKGLLSYRNVKCVTNVEAFSLSVADLEDVTSLFSRFLRNPRVQG
AIRYESPYWRLRAARQIQVAWRYRRRRLQRLYTAQSSYSL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccccaaggagaacgatgatgttcccatgcttccaatctcggacacatctcgt
actaggcctttcacttccaggtctcgtagcgtatccctctcaaacacttgttccaccatt
gatggattcgacagctccacagtggttttaggctacacgggtcctcttcgagcccagaga
cgacctcctttagttcaaatgagtggtcctctttcctctactcgcactcctgagcctctc
tttcttcttccccctccttctgattcagttggtatctcctcgtcacagcctgagaggtat
ccttcttttgctactctggaacataaaaagtcagacgacgagttcgtcttaaaacacgca
aatctcttgagatctggacagttaggtatgtgtaatgatccttactgtaccacttgtcct
tcttattacaaccgcaaagctgcccaaatccccagttccagagtttctgccttctttgac
tccaagttccataatgctctgtatgatgatgctaaaggctgggctaggcggtttgctaca
actgctaatagatacttaccaggaatcatgaatcctcactctaaattcgttcagagctgg
actaagttctttgccctctcatgcttgttggctattttcatagatcctctcttcttcttt
ctcatattagtcaaacagaacgacaaatgcattgtgattgattggccgatggctaaagca
tttgtagctgttagaagtgtaacagatattttattctctgtaaacattctgcttcagttc
cgattggcctatgtagctcccgagtctacagttgttggtgctggccagttagttgctcat
ccaaggaaaattgctcggcattacttccgaggaaagtttttactagacttgttcatagta
atgccacttccacagatattgatattatggataataccagcacacttaggtgcatctggg
gcaaattatgcaaagaacctgctacgtgctgcagttcttttccagtacattccgaagttg
tatagactactaccacttcttgctggccaaacacctacaggcttcatatttgagtctgct
tgggctaattttgttattaatcttctcacctttatgcttgctggtcatgttgttggctct
tgctggtatctttttggtctgcagagagttaaccaatgcctacgagatgcttgcggtaac
tctgatcatgaatgtagaaatcttatagattgtggtcgtggagagagctctgaagcgttt
gctgcatggaaaggtaatgcaagtgcaagtgcttgttttcaagagggtggttttccttat
ggaatctatatgaaggcagtcaatctcaccaatcatactagcctcttcacaagatatagt
tactctcttttctggggttttcagcaaatcagcacgcttgctggaaaccaagtcccaagt
tactttcttggggaggtcttctttaccatggggattatcggtctggggctattgcttttt
gcgcttcttattggtaatatgcagaacttccttcaagctcttggtcgaaggaatcttgaa
atgacgctgagacggcgtgatgtggagcaatggatgagccatagaaggttgccagaaggt
ataagaaagagggtgcgagaggctgagcggttcaactgggctgctactagaggagttaac
gaagaattgctatttgagaatatgcctgatgaccttcaaagagatataagacgacacctc
ttcatttttctcaagaaggtgaggatattttctttgatggatgaatcaatcttagatgcc
atccgtgagaggctgaaacagaggacatacataagtagtagcacggtcttgcaccgtgga
ggtctagttgagaaaatggtatttatagtgagaggtgagatggagagcattggtgaagac
ggttctgttcttcctttatcagaaggagacgtttgtggtgaggagctcctcacttggtgc
cttgaacgatcttctgttaatcctgatgggacgaggataagaattccatcaaagggattg
ctaagctacagaaatgttaagtgtgtgacaaacgtggaggcgttttccctgagtgtagca
gatcttgaagacgtaacaagcttgttctcgagattcttaaggaatcctagagtgcaagga
gccattaggtatgaatctccatattggaggctacgagcagctaggcagattcaagtggca
tggagataccgaaggagacggcttcagagattgtacactgctcagtctagttacagcctt
tag
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