Brassica rapa (field mustard): 103839156
Help
Entry
103839156 CDS
T03449
Name
(RefSeq) protein CHROMATIN REMODELING 4 isoform X1
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
PHD
ResIII
DUF1087
PHD-1st_NSD
HTH_CHD1_Hrp3
Chromo_MIT1
zf-UBR_1
PHDvar_NSD
zf-HC5HC2H
SnAC
AAA_22
Motif
Other DBs
NCBI-GeneID:
103839156
NCBI-ProteinID:
XP_009113890
UniProt:
M4EFL2
LinkDB
All DBs
Position
A09:complement(13469718..13479290)
Genome browser
AA seq
2222 aa
AA seq
DB search
MTDSGSEMLDRDWVMKQKRRKLPSILDSLDQKEDSSAAAIDSPDKPTKHQLKAGPTPERT
SKRKGQSLPENNSLAFGSPEHTSSDKLTNQQPSVDLTPEGNSSKRKGHDGNYFECVICDL
GGDLLCCDSCPRTYHTDCLTPPLKRIPNGKWICPKCSPDSGALKPTTRLDAISKRARTKT
SKRNSQDRPKSERASQIYCSSLVSGEPSSEKGKSISAGESKSIGKEVMDGCSAELGHVSA
DDQPDSPVIPTAYPPSSEDLPESKLSNTGKSHEAPVERVPHACSEMVVNDTIGEAETGKG
KRKKRKREPNDGETVKECKADKKRTKKSLSKVGSPKTKTSESSKKKKKKKNRVTLKSLSK
TQSKVEVPEKVKKLSKEERRAIRDADKSSSYLDVKNSIPPTNLQVDRVLGCRVQDPNKTS
LYGALSDDLCSDNLQDNDQRDSTVKDTNADTVVTEDRTDSSSETGKSSRNSRLKDRDMDE
SAVGTECLVDEKEDMVSEDTFDATVSRHVDNEDKKASEAPVSVDAHHEMGGKIPVAGEEV
EEPVAAKAADLIGETVSYEFLVKWVGKSNIHNSWISEADLKSLARRKLENYKSKYGTAVI
NICEDKWKQPQRIIALRVSKEGHQEAYVKWTGLAYDECTWESLEEPIIKESPHLMDLFQK
YERKTLERDISKGISPRTRGEGQQSEVITLTEQPSELRGGALFPHQLEALNWLRRCWHKS
KNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVV
EYHGGAKARAIIREFEWHAKSSTETTKKMKPYKFNVLLTTYEMVLADSSHLRGVPWEVLV
VDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFE
EKFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT
KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLT
LLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNVEFGPKTFERVDGSVAVADRQAAIAR
FNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKQLLVY
RLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFNDSAGANKKDTS
ESNGNLDVIMDLESKSRKKGGGLGDVYQDKCTDGNGKIVWDETAIMKLLDRTNIQSPSTD
GADTELENDMLGSVKPVEWNEETAEEQVGAESPPLVADDTDEHSSERKDDDVVTFTEEND
WDRLLRMRWKRYQSEEEATLGRGKRLRKAVSYREAYAPNTSGAVVEDGGEDEKEPELKKE
YTPAGRALKDKFTKLRERQKNRLAKRNAVEDSIPNGNVDQVTEAANQDEESPVMMDVDDS
QQCDAQKRKSRPLRLDGSSDPTPDLPSQHLNGAECPPSLPPNNLPVLGLCAPNFTQPEPS
RRNYSRPSSRQNRTIPGPHFPFSLPQRSGSVEREVNNQEPSMGNLKPHNVKEEPSQQPLS
NMDGWLPVRPFPPSGDFERPRSSGAALAEFQEKFPLLNLPFDDKLLPRFPFQQRNMGTSH
QEIMANLSLRKRFEGSGHSMQDLFSMPPMPFLPNMKVPPVDPPVFSQQEELPPLGLDQFS
SALSSIPENHRKVLENIMLRTGSGLGHLQKKKTRVDAWSEDELDSLWIGIRRHGYGNWET
ILRDPRLKFSKFKSPEYLAARWEEEQRKFLDSLSSLPSKSSRTDKSTKTPLFPGLPQGIM
NRALHGTKYATPPRFQSHLTDIKLGFNDLASTLPLFESSNHLGLRSEPFPPLDLSGDPSA
GPSNTPSDKPFPLNSLGMGNLGSLGLDSLSSLNTQRTDERRDAIKRGKLPLFLDMQLPPM
LDSSNNVFLGRSANPSLLDPNRVMNLSNPMGKDVLGGTSSSENKLPHWLRDAVTVPAAKS
PEPPTLPPTVSAIAQSVRVLYGKDSTTIPPFVIPEPPPPVPRDPRHSLRKKKKRKSRPSS
QMTTGIASSSHNVAESSSQGNPPTPPLLPPSLSGEPSGSSQANLPHQNLNITEPSSSEPI
RVQAPQEDYVVAAEPSEVPKPSLEEVTGTSRSVSPEHKISEPKSTNEDGDSDLETCEKNE
ADQLMIHSDDKHLDVKQENQQSENASNKQCEPTEAETPNTDTEQEDNEESIKMVIDISPG
DD
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgacagattctggcagtgaaatgcttgatagagattgggtcatgaagcagaaacgaaga
aagcttccgtctattctggattcgttagaccaaaaagaggattcttctgcggcggctatt
gattctcctgataaaccaactaagcatcagcttaaggctggtccaactcctgaacggacc
tcgaaaagaaagggacagtcccttcctgaaaataattctttggcttttggttctccggaa
cacacttcttctgataagctaactaatcagcagcctagcgttgatttgactcctgaagga
aattcctctaaaaggaagggacatgacgggaattattttgaatgtgtgatctgtgacctt
ggtggtgatttgctgtgctgtgatagttgtcctcggacctatcataccgattgcctcact
cctcctcttaagcggattccaaatggcaagtggatctgcccaaagtgttctccagacagc
ggtgcgctaaagcctaccacacgtctagatgccatttcaaagcgggcaagaacaaaaacc
tcgaaaagaaattcacaagacaggccaaagagcgagagagcttcacagatatattgcagt
tctcttgtttctggagaaccatcttcagagaaaggaaaaagtatttcggctggggagagc
aaatccataggaaaggaagtgatggatgggtgttctgctgagcttggtcatgtatctgcg
gatgaccaacccgattcacctgtcatacccactgcatatccgccctcctccgaagatctc
cccgaatctaaactatcaaataccggaaaaagtcatgaagcacccgtggagagagttcca
catgcttgcagtgagatggtggtaaacgatacgattggtgaagcagagactggaaaaggt
aaaaggaaaaaacggaagcgtgaacctaatgatggggaaactgttaaagagtgcaaggct
gacaagaaacgtacaaagaaaagtttgtccaaagtgggttctccgaaaaccaaaacatcg
gagtcttcgaagaagaagaagaaaaagaaaaatcgagtgactttaaaatctttgtccaaa
actcagtccaaggtggaagtaccagagaaagtgaagaagctttccaaggaggaacgtcgt
gcaatacgtgacgcagataaatcttctagttatttggatgtcaaaaactctattcctcct
acaaatctacaggtggatcgtgttttaggatgccgagtccaagatcctaataagacctcg
ctgtatggtgctctttcagatgacttatgttctgataatttacaagataatgaccagcga
gatagcacagtgaaagatactaatgctgatacagtggttaccgaggacagaacagattcc
tcttctgagacaggtaaaagttccagaaattcacgtctgaaggatagagatatggatgaa
tctgctgtaggtactgagtgtttggttgatgagaaagaagatatggtttcagaagacact
tttgatgccacagttagtagacatgtggataatgaagataaaaaagctagtgaagcacct
gtctctgttgatgcacatcacgaaatggggggaaagatccctgtggcaggggaagaagtt
gaggagcctgttgccgctaaagctgcagatcttattggagaaactgtttcatatgagttt
cttgttaaatgggtgggaaaatctaatatccataacagttggatttctgaggcggacctc
aaaagtctcgctagaagaaaactagaaaactacaaatcaaagtacggaacagctgttata
aatatctgtgaagataaatggaagcagcctcagcgaataattgctctccgggtttcaaaa
gaaggtcatcaagaagcttatgtaaaatggactggtctagcttatgatgaatgcacatgg
gagagcttggaggagcctattattaaggaatcaccccatttgatggatctctttcagaag
tatgagcggaagacattggaaagggatataagtaagggtatttccccaaggacaagaggt
gaaggtcagcaaagtgaagtcattaccctcacagaacagccttcagaactcaggggaggc
gccctatttccgcatcagcttgaggccctgaattggttgcgtagatgctggcataaatcg
aaaaatgtaatacttgctgatgagatggggcttggaaaaacagtgtccgccagtgcgttt
ctctcctcactttattttgaatttggagttgcaagaccttgtttggttttggttccactt
tcaacaatgccgaactggctatccgagttttctctttgggctccactccttaatgttgtg
gaatatcacggtggcgcaaaagccagagccataattcgagagtttgagtggcatgctaag
agctctactgagacgaccaagaagatgaagccctacaaatttaatgtcctcttaactact
tatgaaatggttctggccgactcatctcatttgcgtggagttccatgggaagttcttgtg
gttgatgaagggcatcgtctaaagaattcagaaagtaagctgtttagcttgctcaacaca
ttctcttttcaacaccgtgtacttttgactgggacccctcttcaaaataacattggtgag
atgtataatctgctcaacttcttgcaaccatcttcattcccttctttgtcttcttttgag
gagaagtttcatgatctgacaagtgctgagaaagtagaggaactgaagaaacttgttgct
cctcatatgcttcgacggcttaaaaaagatgccatgcagaatattcctccaaagacagag
aggatggtccctgttgagttgtcatcaatccaggctgaatattatcgtgcaatgttaact
aagaactatcagatactacgaaatatcgggaaaggggtagcacaacaatcaatgttgaac
atagtgatgcagttgagaaaggtgtgcaatcacccatatctgataccaggcacggagcct
gagtctgggtctttggagtttcttcatgatatgagaataaaagcatcagctaagttgact
ctgttgcactccatgctcaaggtgcttcataaggaaggccacagagttctgatattttca
cagatgacaaagcttttagacattctggaggactacttgaatgtagaatttgggcctaaa
acatttgaaagggtggatggttctgttgctgttgctgatcgtcaagcagctattgcacgt
ttcaaccaagacaaaaatcggtttgtttttctgttatctacacgtgcatgtggtcttggt
atcaatctggcgacagctgatactgtcattatctatgactctgatttcaacccccatgct
gatattcaagccatgaatagagctcatcgaattggacaatccaaacaacttctggtttat
agacttgtcgtccgtgccagtgtagaagagcgtattctgcagctggccaagaagaaattg
atgctcgatcagctatttgtaaacaagtccggatctcagaaggaatttgaagatatcctg
cgctgggggactgaagaacttttcaatgactctgctggtgcgaacaagaaagatacatct
gaaagtaatggcaacttagatgtaatcatggatttagaaagcaagagccggaaaaagggt
ggtggcctcggagatgtttaccaggacaaatgtacagatggaaatgggaagattgtttgg
gacgagactgcaataatgaagctgcttgatcggacaaatattcaatcaccctccacagat
ggcgctgataccgagttggagaatgatatgctcggctccgtaaagcctgtggaatggaat
gaggaaacagctgaagaacaagttggagccgaatcacctcctctggtggctgatgatact
gatgaacatagttcagaaaggaaagatgatgatgtagttacttttacggaagaaaatgac
tgggacaggcttctgcgtatgagatggaagagatatcagagcgaggaagaagcaacgctt
ggtagaggaaaacgtttgagaaaggctgtttcatacagggaagcatatgccccaaatacc
agtggagctgtagtcgaggatggcggtgaagatgagaaagaaccagaacttaaaaaggaa
tatacacctgcaggccgagccctaaaagacaagttcacaaagctgcgagaaaggcaaaaa
aatcggcttgcaaaaaggaatgctgttgaagactcaattcctaatggcaatgtggatcag
gtaactgaagcagctaatcaagacgaagaaagccctgtaatgatggacgtggacgatagc
caacaatgtgatgcacagaaaagaaaatccagaccgctaaggctagacggttcttcagat
cctacaccagatcttccaagtcaacatcttaatggcgcagaatgtccaccatctttaccc
ccaaacaacctgccggttcttggactgtgtgctcctaattttacgcaaccagaaccctcc
cggagaaattattctcgtccaagtagtagacagaacaggaccataccaggacctcatttt
cctttcagtctaccccaaagatcgggttcggttgagagggaagtaaacaaccaggagcct
tctatgggtaatctaaaaccacataatgtaaaggaggaaccttctcagcagcctcttagt
aatatggatggttggcttccagttcgtccgtttcctccgtcaggggattttgagcgtccc
cgaagttctggtgctgctttggctgagttccaggagaagtttccgctacttaacctacca
tttgatgataagctgcttcctcgatttccatttcagcagagaaacatgggaacttcgcat
caggaaatcatggctaatctttctctgaggaaaagatttgaaggaagtggtcattctatg
caagacctattttccatgccaccgatgccgtttctaccaaatatgaaagtccctcctgtg
gacccacctgtgttcagccaacaagaggagttaccgcctctgggtttggatcagttttca
tcagctctttcatctattccggagaaccatcgaaaggttcttgagaacataatgctgaga
acaggctctggacttgggcacttgcagaaaaagaaaacaagagtagacgcatggtccgag
gatgaactagattctctctggattgggattcgcagacatgggtatggaaactgggagaca
attctcagagatccaaggctaaaattttccaaattcaaatctccagagtacttggcagcg
aggtgggaagaagagcaacgtaaattcttggatagtctttcttctcttccatctaagtca
agcaggacagataagtccaccaaaactcccttgtttcctggtcttcctcaaggtataatg
aaccgggctttacatggaactaaatatgctactcctccaaggttccagtcccacctcaca
gacataaagctcggattcaacgatctagcatctacccttccgttgtttgagtcctctaat
cacttgggattgcgaagtgagccttttcctcctctggacctttctggtgatccttctgct
ggaccatcaaatactcccagtgacaagccttttccactcaactctcttggaatgggaaac
ttaggttcgctgggtttggatagtttaagctccttaaacacacagagaactgatgaaaga
cgtgatgccattaagcgcggaaaactgcctttgtttctagatatgcagttacctccaatg
cttgattcaagcaacaatgtgttcttgggaagatcagccaatccatctctccttgatcca
aaccgagtgatgaatctctccaatccgatggggaaagacgtattgggaggtactagctct
tcagagaacaagttacctcattggttacgggatgctgtgactgttcccgctgcaaagtca
cctgaaccacccaccttacctccaaccgtctcagctatagctcaatcagtccgagtttta
tatggtaaagattctactaccattccaccgtttgtgataccagagccgccacctcctgtt
ccaagagatccaagacacagtctgagaaagaaaaagaaacgtaaatcacgtccatcaagc
caaatgactacaggcattgctagtagcagccacaatgtagcagaaagcagctctcaaggc
aatccaccaactcctcctttgcttccaccatcgctgtcaggtgaaccttctgggtcctct
caagccaatttgccacatcagaacctaaacatcacagaaccatcttcctccgagccaatc
agagttcaagctcctcaagaagattatgtggtagcagcagaaccatctgaagtaccaaag
ccaagtctagaggaagtcactggtacgtcaagatctgtatcgccagagcacaaaatctct
gaacctaaatctaccaacgaggatggagactcagatttagaaacttgtgagaaaaatgag
gctgatcaacttatgattcattcagacgataagcatttggacgtgaagcaagagaaccaa
cagtctgagaatgcctcaaacaagcaatgtgagcccacagaggctgaaactccaaacacc
gacacagaacaagaagataatgaagaatccataaagatggtgattgatatttctccaggt
gacgattga
DBGET
integrated database retrieval system
