Brassica rapa (field mustard): 103839205
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Entry
103839205 CDS
T03449
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
brp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103839205
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103839205
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103839205
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103839205
03036 Chromosome and associated proteins [BR:
brp03036
]
103839205
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103839205
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103839205
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103839205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
Phage_Inh_C
CDC24
Motif
Other DBs
NCBI-GeneID:
103839205
NCBI-ProteinID:
XP_009113951
UniProt:
A0A397XWX4
LinkDB
All DBs
Position
A09:complement(13104139..13108577)
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AA seq
531 aa
AA seq
DB search
MDIEEVHILDPELLQLPGLSVKSNPLIAEELFSHWLSLPDTSRLVKSLIDDTKSSTPVSI
SKNCANLNIACGSALPSLFLNSGTPPLSPRASSGSPRFSRQKTSPFSLQSPLRSLREPKP
QLIPQFYFQHGPPPAKELKEQCLSMVDHLFSDFIDGLRMNEFKTVTKEVCKLPSFLSSVL
FRKIDVDSTGIVTRDAFIKYWVDGHMLAMDLASQIYNILRQPGCEYLRQADFKPVLDELL
ASHPGLEFLRNTPEFQERYAETVIYRIFYYINRSGTGCITLRELKRGNLVAAMQQVDEED
DINKVIRYFSYEHFYVIYCRFWELDGDHDFLIDKENLLKYGNHALTYRIVDRIFSQVPRK
FTSKVEGKMSYEDFAYFILAEEDKSSEPSLEYWFKCIDLDGDGVISPNEMQFFYEEQLHR
MECITQEPVLFEDILCQIFDMIKPEKENCITLKDLKASKLSRNVFNILFNLNKFMAFETR
DPFLIRQERENPTLTEWDRFAQREYVRLSMEEDEVSNGSADVWDEPLESPF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatatagaggaagttcatatactggatccagagctcttgcagcttcccggtttgtcc
gttaaatcaaaccctcttatcgctgaggaactcttctcccactggctttccctccccgat
acttcccgattggtcaagtctttgattgacgatacgaaatctagtaccccagtcagtata
tccaagaactgtgccaatctcaacatcgcttgcggaagtgccttgccttctctctttctc
aacagcggcactccccctctttcccctcgtgcctcttccggctctccccgtttctccagg
cagaagactagccctttctctctccagtcccctctcagatctctcagggaaccaaagccc
caactcatccctcagttctacttccaacatggccctcctcctgcaaaggaacttaaggag
caatgtttatccatggttgatcatctttttagtgactttattgacggtcttcgtatgaat
gagttcaaaaccgttacaaaagaagtctgcaagctgccttcttttctttcttctgtactt
tttagaaagatagatgtggattccaccggtatcgttaccagggatgcttttatcaagtac
tgggttgatggacatatgttggcaatggacttagcctcacagatatataatattttaagg
cagccaggctgcgagtacctcagacaggctgacttcaaaccagttcttgatgagctacta
gcatctcatcctggcttggaattcctgaggaatacacctgaatttcaagaaagatatgcg
gagacggtcatctacagaatattttactacataaacagatcgggaactggttgcattact
ttgagagagctgaagcgtggaaatcttgttgctgctatgcaacaagttgatgaagaagac
gacatcaataaagttattaggtacttttcctatgagcatttctacgtcatctactgcaga
ttttgggaactcgatggcgaccatgatttccttatcgataaggaaaacctcctcaaatat
ggtaaccatgcccttacctacaggattgtcgacagaatattttcacaggtcccaaggaaa
tttactagcaaagttgaggggaagatgagttatgaagattttgcatacttcattctcgct
gaggaggataagtcatctgagcctagtcttgagtattggttcaagtgcatagacctggat
ggagatggggtgatcagtccaaacgaaatgcagtttttctatgaagagcagctgcatcgc
atggaatgcataacccaggaacctgtactcttcgaggatatcctatgccaaatattcgac
atgattaaacctgagaaggagaactgtatcacactcaaggatctgaaagcatcaaaactt
tctagaaatgttttcaacatactcttcaacctgaacaaattcatggcgtttgaaacccgt
gacccctttctcattcgccaggagcgggaaaatccaacattgacagaatgggaccggttt
gctcaaagagagtatgtgaggttatctatggaagaagatgaagtctcgaatgggagtgca
gatgtttgggatgaaccactcgaatctccattttaa
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