Brassica rapa (field mustard): 103839220
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Entry
103839220 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-6-like
KO
K10357
myosin V
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103839220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103839220
04131 Membrane trafficking [BR:
brp04131
]
103839220
03029 Mitochondrial biogenesis [BR:
brp03029
]
103839220
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103839220
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103839220
mRNA cycle factors
P-body specific factors
103839220
Membrane trafficking [BR:
brp04131
]
Others
Actin-binding proteins
Myosins
103839220
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103839220
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103839220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
103839220
NCBI-ProteinID:
XP_009113971
LinkDB
All DBs
Position
A09:complement(12983153..12992712)
Genome browser
AA seq
1538 aa
AA seq
DB search
MAGNFSPSVGSCVWVEDRDEAWIDGEVVEVNGEDIKVLCTSGKHVVTKASAVYPKDTEAP
ASGVDDMTRLAYLHEPGVLQNLHSRYDINEIYTYTGSILIAVNPFRRLPHLYSSHMMAQY
KGAALGELSPHPFAVADAAYRQMINDGVSQSILVSGESGAGKTESTKLLMRYLAYMGGRA
ASEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDERGRISGAAIRTYLLE
RSRVCQLSDPERNYHCFYMLCAAPKEDVQRYKLGEPKTYHYLNQSKCLEVDSINDAEEYH
ATRRAMDVVGISTEEQDAIFSVVAAILHLGNVEFAKGAETDSSVPKDEKSLFHLKTAAEL
LSCDEKALEDSLCKRIMVTRDETITKTLDPEAATLSRDALAKVMYSRLFDWLVDKINSSI
GQDPDSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIN
WSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHNRFTKPKL
ARSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLNSSSCSFVASLFPPTSDDSNKSK
FSSIGTRFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENENILQQLRCGGVMEAIR
ISCAGYPTRKHFDEFLNRFGILAPEVLVKNSDDPAACKKLLEKVGLEGYQIGKTKVFLRA
GQMADLDTRRTEVLGRSASIIQRKVRSYLAKKSFILLRNSAKQIQSVCRGYLARNVYEGM
RREAAALKIQRDLRMFLARKDYTELCSAAVSVQAGMRGMVARNELCFKRQTKAAIVIQTW
CRGYLARLHYRKLKKATITTQCAWRSKVARGELRKLKMAARETGALQEAKNKLEKQVEEL
TWRLQLEKRIRTDLEEAKKQESAKAQSSLEELELRCKETEALLIKEREAAKKVTEIAPII
KEVPVVDQELMEKITNENEKLKGLVSSLEMKIDETEKKLQETTKISEDRLKQALDAESKL
VKLKTAMQRLEEKIIDMEAEKNIMRQHQQTISSTPVRTTLGHPPTTPFKNLENGNQINLE
SEFNEAEFTTPVAGNAEKSAAERQIMDADALIDCVKDNIGFSNGKPVAAFTIYKCLLHWK
CFESEKTNVFDRLIQMIGSAIENEDDNSHLAYWLTSTSALLFLLQKSLKTGGSGAAQSKK
PPTATSLFGRMAMSFRSSPASGNLAAAAEAAANAVIRPVEAKYPALLFKQQLAAYVEKMF
GMVRDNLKKELSTLLSLCIQAPRTSKGGMLRSGRSFGKDSPATHWQSIIDGLNSLLVTLK
ENHVPLVLIQKIYSQTFSFINVQLFNSLLLRKECCTFSNGEFVKAGLAELELWCCQAKEY
AGPSWEELKQIRQAVGFLVIHQKYRISYDDIAHDLCPGLSVQQLYRICTLYWDDSYNTRS
VSQEVISSMRALMTEESNDADSDSFLLDDDSSIPFSIDDISSSMQEKDFVGIKPAEELLE
ILLLYSCTKKFLKVEKLRFLKLSSSLFFTLGVERRGPS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaacttcagtccttcagttgggtcgtgtgtgtgggtggaggaccgtgacgaa
gcatggatcgatggtgaagttgtagaggttaatggcgaagatatcaaagtcctatgcact
tcagggaaacatgttgttacaaaagcatctgctgtttatccgaaagatacggaagcgcca
gcatctggagttgatgacatgacaagacttgcttatttgcatgagcctggagttctacag
aatttgcattcaagatatgatattaatgagatttatacttatacaggaagcatactgatt
gctgttaatccgtttagaagacttccacatctttatagtagccacatgatggcgcagtat
aaaggagctgccttaggggagctaagtccacatccattcgccgtcgcagatgctgcatac
agacagatgattaatgacggagtaagtcaatctattctggttagtggagaaagtggggct
ggtaaaactgaaagcacaaagttgctgatgagatatcttgcttacatgggagggagagct
gcttctgagggaagaagtgttgaacaaaaagtgttggagtcaaatcctgtgttggaagca
ttcggaaatgcaaagactgtcaggaacaataattccagtcgttttggtaagttcgtggag
attcagtttgacgaaaggggaaggatatcaggagctgccataagaacttatttgttggaa
agatcacgtgtatgtcagctttctgatcctgaaagaaactatcactgtttctacatgctt
tgtgctgctcctaaagaagatgtgcagagatacaagttgggtgaaccaaaaacataccac
tatctcaatcaatctaaatgtctagaggtggatagtataaatgatgctgaggaataccat
gccacaagacgtgctatggatgtcgtcggtatcagtactgaagagcaggatgcgattttc
agcgttgttgctgccattctccatctcgggaatgtcgagtttgctaaaggagcagagact
gattcatcggttcctaaagatgaaaaatcattgtttcatctgaaaaccgcagctgaactt
ctcagctgcgatgaaaaggcacttgaggattcactatgcaagcgtatcatggtaactcgt
gatgaaaccatcacaaaaactcttgatccagaagctgctactcttagtagagatgctttg
gctaaagtcatgtactcacggttgtttgactggcttgttgacaagattaatagttcaatt
ggtcaagatcctgactcaaagtacttgattggtgttcttgatatttatggattcgagagt
ttcaagacaaacagttttgagcaattttgcatcaatctgaccaatgaaaaacttcagcag
cattttaatcagcatgtctttaaaatggagcaagaggagtataagaaggaggagatcaac
tggagctatatagagttcgtagacaatcaagatatcttagacttaatagaaaagaaacct
ggaggtattattgctctgctagatgaggcttgcatgtttccaaggtcaacacatgaaact
tttgctcagaagctataccagacattcaaaaaccacaaccggtttaccaaaccgaaatta
gctcgtagcgacttcacaatttgtcattacgctggtgatgtcacttatcagacagaactt
ttcttggacaagaacaaagattacgtaattgccgagcatcaagcattgttaaattcttct
agttgttcctttgtagcaagtttgttcccaccaacgtctgacgattccaataagtctaaa
ttctcatctattggtacccgtttcaagcaacaattggtatcattgcttgagattctcaat
accacggagccacactatattcgctgtatcaaaccaaacaatcttctcaagcctggaatc
tttgagaacgaaaacattttacagcaactacgttgtgggggagtgatggaggcaatcagg
atcagttgtgctggctatcctaccaggaaacatttcgatgagttcttgaacagatttggc
attcttgctccagaagtgttggtcaagaactctgatgaccctgctgcttgcaagaagctt
ctggagaaagttggactcgaaggttatcagattggcaagacaaaggtttttctgagggct
ggacaaatggcagacttggataccagaaggactgaggtcttgggaagatcagcaagcatt
atccagagaaaagtccggtcttatcttgctaaaaagagtttcatccttctgcgtaattct
gctaagcagattcagtcagtttgcagaggctatcttgctagaaatgtatatgaaggcatg
cgcagggaagctgctgctttaaagatacagagagacttgcgcatgtttctggctaggaag
gattacacagaactgtgttctgctgctgtttcggtccaagctggtatgcgtggtatggtt
gcccgtaacgaactatgtttcaaaaggcagacgaaagcagcaatagtaattcagacttgg
tgccgtggatacttggcccggctgcattacagaaaactaaagaaagcaactatcacgaca
caatgtgcatggaggtcaaaggttgctcgtggggaacttcggaagcttaagatggctgct
cgagaaactggagcacttcaagaagccaagaacaagctagagaagcaagttgaagagctg
acctggagattgcagttagaaaaacggataaggaccgacctggaagaggccaagaaacaa
gaaagtgcaaaagcgcagtcttctttggaggaattggaacttagatgcaaagaaacagag
gcattgcttatcaaagagcgtgaagctgcaaagaaagttaccgagatcgcgcccattatt
aaagaggttcctgtggttgatcaggaattaatggagaagatcacaaatgaaaatgaaaag
ctaaagggactggtgagttcgctggaaatgaaaatcgatgagacagagaaaaaacttcaa
gagacaaccaagattagcgaggatagacttaagcaagcattggatgctgaatccaaacta
gtgaagttgaaaaccgcaatgcaaaggcttgaagagaaaatcatagacatggaagctgag
aaaaacattatgcgtcagcatcagcaaacaatctcaagcactcctgtgaggactactcta
ggacatcctccaacaacaccttttaagaatttggaaaatggcaaccagataaacttggaa
agcgagttcaatgaagctgagtttacaacaccagttgctggcaacgctgagaaatctgct
gcagaacgtcagattatggatgccgatgctctcattgactgtgtaaaagacaacatcggt
ttcagcaatgggaaacctgtggctgcatttacgatatacaagtgtcttcttcactggaag
tgttttgaatctgagaagaccaatgtgtttgatcgtctgattcagatgattggttctgcc
attgagaatgaagatgacaatagtcacttggcgtattggttgacaagcacatctgcgcta
ttatttttgcttcaaaaaagtcttaaaaccggtggcagtggagcagcacaaagcaagaag
ccacctactgcgacttctttgtttggaaggatggccatgagcttccgctcatcaccagct
tcaggcaacctagctgcagcagctgaagccgctgctaacgcagtgatccgtccagtggag
gcgaagtacccggctctgcttttcaagcaacagcttgcagcctatgttgagaaaatgttt
gggatggttagagataacttgaagaaagagttatcgactttactttctctatgcattcag
gcgccaagaacttctaaaggagggatgctaagatctggtaggtcctttggaaaagattct
cctgcaactcactggcaaagcattatcgatggtctcaattcgcttcttgtcacattgaaa
gaaaatcatgttcctttagttctcatccagaagatatactctcaaactttctctttcatc
aacgtacaacttttcaacagccttcttctgcggaaagagtgctgtacatttagcaatgga
gagtttgtcaaagccgggcttgctgagctagagctatggtgttgccaagccaaagaatat
gctggaccgtcttgggaagaactgaaacaaattagacaagccgttgggttcctggttatc
caccaaaagtacagaatctcatatgatgatatagcacacgatctttgcccgggactcagt
gtccagcagctttaccgtatttgcacattatactgggacgatagctataacaccagaagc
gtctcacaagaagttatatcgagcatgcgggcactcatgacagaggaatccaatgatgca
gacagtgattccttcttgttggatgatgattccagtattcctttctcaatcgatgatatt
tcaagttcgatgcaagagaaggactttgtaggaatcaaaccagcagaggaacttcttgag
atcctgcttttgtattcttgcactaagaagttcctgaaagttgagaagctcagattctta
aagctctcttcctctttgttttttactcttggggtggagaggagggggccttcctga
DBGET
integrated database retrieval system
