Brassica rapa (field mustard): 103839575
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Entry
103839575 CDS
T03449
Name
(RefSeq) transcription factor MYC1-like
KO
K13422
transcription factor MYC2
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04016
MAPK signaling pathway - plant
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103839575
04075 Plant hormone signal transduction
103839575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103839575
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103839575
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Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
103839575
NCBI-ProteinID:
XP_033136834
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All DBs
Position
A09:14680259..14687174
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AA seq
507 aa
AA seq
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MDSLNTNVTASMIDALMSSPSSGFWPPQSPANPSPDSALQKRLQAVLNGTHEAWTYAIFW
TPSYYDYSGESVLKWGDGIYKGEEADNTRRRRRRMTVAEREHWSIILPELSSMISDEDVP
VIDGEGGVEVSDTEWFYMVSMTVSFGSETGLPGKAFATYKPVWVTGSDPILASGCDRAKK
GGDSGLQTIVCIPLDNGVLELGSTVEIQQNPDLFNKIRVVFSFEGSRDFLGDPNSNSFQP
FSTHLENGGGSTTVTVNANLYPNPVYPQTVNYATSPLERALHSPNRNYPHQIPIDNGELL
HSAGDIDGSDHSDIEATVVPGNKQKKKRGRKLANGRKEPLNHVQAERLRREKLNQRFYAL
RATVPNVSKMDKASLLGDAISYIKELKSRAENAESERNAIQIQLNKLKEEMAGRNVVCRG
GENASEIETANIDVKILGCDAMVRLESSKRNHPAARLMNAFMDLDVELNHASISVIHDLM
IQQATVKMGSRMYTQDQLQAMLVSKIN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggatagcttaaatacaaacgtcaccgcatcaatgatcgacgctctcatgagctctccc
tcttccggtttctggccgccacaatctccggcgaatcccagcccagacagtgctctccag
aagcggttacaagctgtgttaaatggcacccacgaggcttggacctacgccattttctgg
acaccgtcgtactacgactattccggcgagtcggtgctcaaatggggcgatggaatttat
aaaggcgaagaagctgataatactcggcggaggaggaggaggatgactgtggcggagaga
gagcactggagtatcattttgccggagcttagctcgatgatctccgacgaagatgtgccg
gtgatagacggcgaaggtggcgtggaagtgtcggatacggagtggttttatatggtttca
atgacggttagctttggtagtgagaccgggttacccggtaaggcgtttgctacgtataaa
ccagtttgggttaccgggtcggatcctatattggcgtcgggttgtgatcgtgctaaaaag
ggtggggattcagggttgcaaaccatcgtatgtattcctttggataacggagtgttggag
cttggatccacggttgagatccagcaaaacccggatctttttaataagatccgagtcgtt
tttagtttcgaaggatccagagatttcttgggtgacccgaattcgaactccttccagcct
ttctcaactcatttagagaatggtggtggttcaactaccgtaaccgtcaatgctaacctg
tatccgaatccggtttatccgcaaaccgtaaattacgcgacttccccgttagagagagct
ctacatagtccgaacaggaattatccccatcagataccgatagacaacggtgaactctta
cattccgccggggacattgatggttctgatcactctgacatagaagccacggtggttccg
ggaaacaaacagaaaaagaaacgcgggagaaaacttgcaaacggtaggaaagagccgttg
aatcacgtacaagcggagcggttgagacgcgagaagctaaaccagcgattctacgcgtta
cgagcgactgtgccaaacgtatcaaagatggacaaagcgtcgttgctaggagacgcgatt
agttacattaaggagctgaaatcgagagcagaaaacgcggaatctgagagaaacgcgatt
caaatacagctcaacaaactcaaagaggagatggcgggaagaaacgtggtctgtaggggc
ggggaaaacgcatcggagattgaaacggctaatatcgacgtgaagattcttggatgcgat
gcgatggttaggctggaatcaagcaagagaaatcatcctgcagcgagactgatgaatgcg
tttatggatttggatgttgagttgaatcatgctagcatttcggtgattcatgatcttatg
attcaacaagctacggtgaagatgggatcgagaatgtacacgcaagaccagcttcaggcc
atgttggtctccaaaattaattag
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