Brassica rapa (field mustard): 103839698
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Entry
103839698 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103839698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103839698
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103839698
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
HECT type E3
103839698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
103839698
NCBI-ProteinID:
XP_009114441
UniProt:
M4DXI5
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All DBs
Position
A01:complement(24224545..24231445)
Genome browser
AA seq
1031 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKEGDARKLLEQTKMERNRRLLQKKHNSAALKIQKVFRGRR
STAIVRSKVRRDFCETYGDNCQNVDRHCFEPASSFLPQFLFFFKAQSSGDFVMLVETCRL
LRKFAHSSGDILSLFSGLDYSSEHNMVDFRVKKLAFTCIEAIHQNRDRLRDQLLVTPEEA
TISTAILMDAMSLLLDPKLPWVCKIVSYLQKRNIFKLVREIVTTAKEGSRSPTMNGSILS
LESVLFLVVPHVGREPCCCPVVDPRWSFSSMILTIPFIWQLFPNLKVVFANPSLSQHYVH
QMALCIQKDTHVLPIDTNTEFPGNACLLGNTLEIANVVLSQPECSLDMAIDIASVATFLL
ETLPPIKSSERESRHSSSEEDDDMLIDDVQELVLNRTLEQQITTNAIDSRFLLQLTNILF
HQVSGGTQSYDEDKEALAIATGSSFLYAAFNILPLERIMTVLAYRTELVAVLWNYMKRCH
ENQKWSSMPSVLAYLPADSPGWLLPLVVFCPVYKHMLTIVDNEEFYERGKPLSLQDIRLL
IIILKQALWQLLWVNPLTQHNSGISVSNDLSKKNRVDLIQNRVGVVIAELLSQFQDWNNR
QQFTSSTDFQADTVSEYFITQAIVEGTRASYILMQAPFLIPFTSRVKIFTTQLATARQSH
GSEEIFAGNRFRIRRDHILDDAYNQMSALSEDDLRGPIRVTFVNELGVEEAGIDGGGIFK
DFMEKITLAAFDVQYGLFKETVDHMLYPNPGSGMIHGQHLQFFHFLGSLLAKAMFEGILV
DLPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGER
TEEELLPGGKDMRVTNKNVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPREWIDMFNE
HELQVLISGSADSLDIDDLRENTNYSGGYNAGHYVIDMFWEVMKSFSTENQKKFLKFVTG
CSRGPLLGFKYLEPAFCIQRAGGSVSNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMY
AISAEAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccgtcgactcggaagcgtgtcgatttaggtggccggagcacc
aaggaaggagatgcccgcaagcttcttgagcagaccaagatggagcgcaatcgtcgtctc
ctgcagaagaagcacaactccgccgccctcaaaattcagaaagtctttagaggtagaaga
tcaacggccattgtgcgctccaaggtgaggcgtgacttctgtgaaacctatggtgataat
tgccagaatgtcgataggcattgctttgagcctgcttctagcttcctccctcagtttctg
tttttcttcaaggcgcaaagctcgggagatttcgtgatgcttgtggagacgtgtcgtcta
ctgcgaaagtttgcccacagcagtggggacattctaagccttttctctggcttggactac
tctagtgagcataatatggtggattttagagtaaagaaacttgcatttacctgcatcgag
gctatacatcagaatagggatcgtttgagggatcagctcttagttactcccgaagaagct
accatttcaacagctatcttgatggatgcgatgtcgttgttgctagatcctaagctgcct
tgggtttgcaaaatagttagctatctacagaaaagaaacatattcaaactggtccgagaa
attgtgactacggctaaggaaggctcaagaagtccgactatgaacggcagcatcctttca
ctagaaagtgtattgtttctggtagtaccacacgttggccgtgagccatgttgctgccct
gttgttgatccacgttggagtttctcatctatgatccttaccataccctttatatggcag
ctcttcccaaacttgaaagtggtctttgctaacccaagtctaagtcaacactacgttcac
cagatggctttatgtatccaaaaggatacccatgttctcccaatagatacaaacacagaa
tttcctggtaatgcttgtcttcttggtaatacattggaaattgcaaacgtggtcttgtca
cagcctgaatgttcattggacatggcaattgacattgcatcagttgcaactttcttattg
gagacacttcctcctattaagtcatcagaaagagaaagcagacatagctcttctgaagag
gatgatgatatgttgattgacgatgtacaagaattagtcttgaataggactttggagcag
cagataactaccaatgctatagactcacgttttcttctgcagttaacaaatattttgttc
catcaagtttcgggtggtacgcagtcatatgacgaagataaagaagcactagctattgcc
acaggcagttcttttctgtatgcggcattcaacattctccctcttgagcgaataatgaca
gttttggcttatagaaccgagcttgtagctgtgttgtggaattatatgaagcgatgccat
gagaaccagaagtggtcatccatgcctagtgtcctagcttatcttccagcggattccccg
ggttggctattacctctggttgtcttttgtcctgtttataagcatatgcttacgattgtc
gataatgaggaattttacgaacgaggaaagccactatcgctacaagatatcaggttgctc
atcatcattctcaagcaagctttatggcagttactgtgggtgaatccacttacgcaacat
aactctgggatatctgtctccaacgacctctcaaagaagaaccgtgttgacttaattcag
aacagggttggggttgtaatcgctgagttactttcacagtttcaagattggaacaaccgg
caacaattcacttcctcgaccgactttcaagctgatacagtcagtgaatattttatcact
caggctatagtggaaggtacaagagccagctacatactgatgcaggctcctttcctgatt
ccgtttacaagcagagtcaaaatattcacaacacaattagcaacggcgaggcagagtcat
ggatctgaagaaatttttgctggaaatcggtttagaatacgaagagatcacatcttggat
gatgcttacaatcaaatgagtgcattgtcagaggatgatctccgaggaccaattcgtgtg
acgtttgtcaatgaactcggagttgaggaagccggtattgatggtggtggcattttcaaa
gactttatggagaaaattaccctagcagcctttgatgtgcaatatgggttgtttaaggaa
accgttgatcacatgctttatcctaatcctggatcaggaatgatacatggacagcatctc
cagttctttcattttctcggcagtcttctcgcaaaagctatgtttgaagggattctagtt
gatttaccatttgcaacgtttttcctcagcaaattgaaacaaaagtacaactatttgaac
gatctaccctctctggatcctgagttgtatcggcatcttatatttctgaagcgttataag
ggcgatatatcagacttggagctttactttgttattctgaacaatgaatatggagagaga
acagaggaagagctacttccagggggcaaagacatgcgagtcacaaataaaaatgttata
actttcattcatctggtttccaatcatcggctaaactttcagatacgccagcagagttct
catttcttgagggggtttcagcaactcattccgagagaatggatagacatgttcaatgaa
catgagctccaggttctcatatctggttcagctgatagtttggatattgacgacttgcga
gagaacaccaattattctggaggctacaacgctggacattatgtgattgatatgttctgg
gaagtaatgaaaagcttctcaacagaaaaccagaagaagttcttgaaatttgtaacgggc
tgttcaagaggaccactgctcggtttcaagtacttggaacctgcgttctgtatacagagg
gctggtggtagcgtgagtaatgaagcagttgatagactaccgacatcagccacttgtatg
aaccttcttaagcttccaccctatcaaagcaaagagcaacttgagaccaaattgatgtac
gccataagcgcagaagcaggctttgatctgagctga
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