Brassica rapa (field mustard): 103839872
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Entry
103839872 CDS
T03449
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03440
Homologous recombination
brp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103839872
03460 Fanconi anemia pathway
103839872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103839872
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103839872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF7943
EarA
DUF6429
DUF6308
HTH_45
Motif
Other DBs
NCBI-GeneID:
103839872
NCBI-ProteinID:
XP_009114608
UniProt:
M4EL00
LinkDB
All DBs
Position
A09:complement(17619821..17623310)
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AA seq
627 aa
AA seq
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MDEERRVVCRENQGLADHVLMKKREYADKPKGLSENLERTFLKAYRNVCDSKDPITTLKD
LSHIKGFGKWMLKMTKGYFDNGAETSEQEDSAGNKGKGRKRYTPQRNSVAYALLITLHRE
TANGKEFMRKAELIDAAEASGLSHAPVGPEKGKGKAGLGNSKREWYSGWSCMTTLIHKGL
VVKSSNPAKYMLTDEGREVANDCITRSGLPTLDILSDDDNETANENFISSCTIREQQTAI
PSDILEKFTPFGYSKEQVVAAFREVSDGSQDKDPSTLWLSVMCHLRQAEVYNPCPDSRNR
RKDSAGPSRPQNCQVDLEGTHAKKSRSSNDGYTLKPSDPLQACSSSLRSDTNIRGLPPLT
FGEAFEEAYQVILILDDREQFATKGSRSRKIVDYICSEFKIKIEVRRLPVGDCIWIARHK
CLGTEYVLDFIVERKNIDDLRSSIRDNRYRDQKLRLQRSGFKKLIYVVEGDPNQSDAAES
IKTACFTTEILEGFDVLRTSGLGETLRKYGHLTKSIHQYYKSLVNDDDGQNKAAAYPCFD
RFVKRCQDLDKMTISDVFAIQLMQVPQVTEEIAIAVLDMYPTLVSLASAYSQLDGNVSAQ
EEMLRNRSNNVISATASKNIFKLVWAE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagagaagggtggtgtgtcgagagaaccaaggattagcggatcacgtgttg
atgaagaagcgagagtacgcagataagcccaagggtctgtccgagaacctggagaggaca
tttctcaaggcgtatcgaaatgtgtgcgactccaaggatcccattaccacactcaaagac
ttatcccacataaagggctttggcaagtggatgcttaagatgacgaaaggatattttgat
aatggagctgaaacttctgaacaagaagactctgctgggaacaagggtaagggaagaaaa
cgctacactccgcaaagaaactctgtggcttatgcattactaataacgttgcacagagag
actgcgaatgggaaggagttcatgcgcaaagcagagcttattgatgctgctgaagctagt
ggcctctcacacgctcctgttggtccagagaaaggaaaagggaaagcaggacttggaaac
tctaagagggagtggtatagtggatggagctgcatgactactcttatacataagggttta
gtggtcaaatctagcaaccctgcaaagtacatgctgacagatgaaggtcgggaagtagca
aatgattgtatcacacgatctggattacctacacttgacatcttatcagatgatgataat
gaaacagctaatgaaaatttcatctcctcttgtaccattagagaacaacaaacagccatt
cctagtgatattcttgaaaagtttacaccgtttgggtattctaaggaacaagtcgttgct
gcattcagagaagtttcagatggatctcaggacaaagatccatcaactctctggttatct
gtaatgtgccatcttcgtcaagcagaagtttataacccctgtccggactctcgaaacaga
aggaaagattcagcaggaccttctagaccgcaaaattgtcaagttgatctggagggaact
catgctaagaagtcccgctctagcaatgatggatacaccttaaaaccatctgatccattg
caagcctgctcatcttctttgcgttcagatactaatatccgaggccttcctcctcttaca
tttggagaagcatttgaggaagcttatcaagtgatcttgatactcgatgaccgggaacag
tttgccactaagggatcacgatccaggaaaatagttgattacatatgctctgaattcaag
atcaagattgaggttagaagattaccagtaggggactgtatctggatcgctaggcacaag
tgccttgggactgagtatgttctggacttcattgttgagaggaagaacattgatgattta
cgctcctcaatcagagacaatcgctacagagaccaaaagcttagacttcagagatctgga
ttcaagaagctgatatacgtcgtggaaggggatccaaaccagtctgatgcagcagaaagc
atcaaaacagcttgtttcacaacggagattctggaggggtttgatgtgttgaggacaagc
gggcttggtgagacgctgagaaaatacggccatctcactaaatcaatacaccagtactac
aagtcgctggtgaatgatgatgatggccagaacaaagcggcggcgtatccttgttttgat
cgttttgtgaaaaggtgtcaagatcttgataaaatgacgatcagcgatgtgtttgccatt
cagcttatgcaggttccgcaggtaactgaggaaatagccatagctgttcttgacatgtac
ccaacacttgtatctcttgcttctgcctattctcaactagacgggaatgtttcagcacaa
gaagagatgttgagaaacaggagcaacaatgtgatttctgcaactgctagtaagaatata
ttcaagttagtttgggctgagtga
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