Brassica rapa (field mustard): 103840168
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Entry
103840168 CDS
T03449
Name
(RefSeq) heat stress transcription factor A-1d
KO
K09419
heat shock transcription factor, other eukaryote
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103840168
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
103840168
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GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
TMF_TATA_bd
BRE1
CC_Bre1
Seadorna_VP6
SpoOE-like
CENP-F_leu_zip
Phage_Gp23
Motif
Other DBs
NCBI-GeneID:
103840168
NCBI-ProteinID:
XP_009114894
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Position
A09:25433940..25437659
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AA seq
490 aa
AA seq
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MDRGNRTKGGSVTMESTEIQPSPQPQPVAVLTGNAPPPFLSKTYDMVDDPATDSIVSWSA
NNNSFIVWDPPQFAKDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQKH
LLKTITRRKPAHGHGPQQSQHSIGQNSSVSSCVEVGKFGLKEEVERLKRDKNVLMQELVR
LRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAVQSPHFLSQFLQQQNQQNEGSRRI
SDTSKKRRFKRDGIVSNNKDSASPDGQIVKYQPPMHEQAKAMFSQLMKMEPYKAGDDGFL
LGNGTSTTTSTEGTEMEISANNITGISLQEMPTASEIQSSSSPSGATPENVTVAEFPTPE
EAIPSPDDLSLPEFADMLQENIAEVPPENFLETNMEDLSPILDSDLFNNDDLPFDIDDIL
RDPDLEPSVDDYASLFQDILMSSPVPDDMEVTPVDVTTKDGETEQKQMDNLTQQMGLLSP
ETIDLSRQNP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcggtaacagaaccaagggaggatctgtaacaatggaatcaacggagattcag
ccttctcctcaaccgcagcctgtggcggtcctaactggaaacgcgcctcctccgttcctg
agcaagacctatgacatggttgacgatcccgcaaccgattcgattgtgtcgtggagtgcg
aacaacaacagtttcatcgtgtgggatccaccacagttcgctaaagatcttcttcccaag
aacttcaagcacaataatttctccagcttcgtcaggcagcttaacacctacggtttccgg
aaggttgaccctgataaatgggaatttgcgaatgaaggtttccttagaggtcagaagcac
ttgcttaaaacaataactcggcgaaaacctgcacacggacatggacctcagcaatctcag
cactcgattgggcagaactcatctgtaagctcatgtgttgaagttggcaagtttggtctc
aaagaagaggtcgagaggcttaaacgagataagaacgtccttatgcaagaactcgttaga
ttaagacagcagcaacaatccactgataaccaacttcaaacgatggtccagcgtctccag
ggcatggagaatcggcaacaacagttaatgtcgttccttgcaaaggcagtacaaagccct
cattttctatctcagttcttgcagcagcagaaccagcaaaacgagggtagtaggcgaatc
agtgataccagtaagaagcggagattcaagcgagatggcattgtcagtaataataaggat
tctgcttctcctgatggacagatagtgaagtatcaacctccaatgcacgagcaggcaaag
gcaatgtttagtcagcttatgaagatggaaccttacaaagccggggatgatggttttctt
ctaggtaacggtacttctactactactagtacagaaggaacagagatggagatttcagcg
aacaacataacgggtatatctcttcaggagatgccaacagcttctgagatacaatcatca
tcatcaccaagtggagcaactccggaaaacgttacagtagctgagtttccaacacctgaa
gaagcaattccctcacctgatgacctgtctctacccgaatttgctgatatgctgcaggag
aatatcgcggaggtgcctccagagaatttcttggaaacaaacatggaagatttgagtcct
atcctagattcagatctgttcaataatgatgatttaccctttgacattgacgacattctg
agggaccccgatttagaaccttcggttgatgattacgcttcactctttcaagacattctc
atgtcaagcccggttccagatgatatggaagtaacaccagtggatgttacaacgaaggac
ggtgagacagagcagaaacagatggataatctgactcaacaaatgggtctcctctcgcct
gaaaccatagatctttcaaggcaaaatccttga
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