KEGG   Brassica rapa (field mustard): 103840300
Entry
103840300         CDS       T03449                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    103840300
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103840300
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103840300
Protein phosphatases and associated proteins [BR:brp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103840300
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103840300
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 103840300
NCBI-ProteinID: XP_009115044
LinkDB
Position
A09:26824352..26829112
AA seq 826 aa
MEHLSVAQSQSEINEDMSLKNHHPPDKDTDKDTSMEQPSSPRHRKVIARWLPDEAQRPIV
DEAPVFSPSLEEFEDTLAYIEKIRPLAEPYGICRIIPPPTWTPPCRLKEKTIWEHTKFPT
RIQNVDLLQNREPMKKKPKSRKRKRRRNSRMGSSRRRSASASASGSSPSEPASSPEAEEK
FGFNSGSDFTLEEFEKYAQHFREAYFEKKDSVGETKWTPSVEDIEGEYWRIVEQPTDEVE
VYYGADLENVVLGSGFYKKGDRDIDQYVVSGWNLNNLPRLPGSVLSFEDCDISGVLVPWL
YVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKTMRKHLPDLFEEQPD
LLHGLVTQFSPSILKDEGVQVYRVVQNAGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDW
LAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASSVGNENTTNLRWKSFCG
KNGTLTNAVQARLKMEEERLADIGRESLSLVKMEKDFDSNCERECFSCFYDLHLSASGCK
CSPDEYACLKHSDDLCSCEEKDRCVLLRYTMDELSSLVRALEGESDDLKIWASKVLGVQH
SDEYQNKTISVTKEEENKLKEGSFDLNIDLELDYLENPKEEEVSTSGEINTSENLSASVE
PINLGFLIFGKLWCNKHAIFPKGFTSRVKFYNVLDPTRMSYYISEVLDAGLMGPLFRVTL
EESPDESFFNVSAQQCWEMVLQRVKHTSTNLGLTTLPRLESINGLQMFGLLSQSTVQAIE
ALDPNHRLIEYWNHKNQTQSESKDHFISSNCSVSLTKGKLFGVDLM
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggagcatctcagtgttgctcaatcacaatctgagatcaacgaggatatgtctctgaag
aatcatcatccaccagacaaggatacggacaaagacactagcatggaacaacctagtagt
ccacgtcatcgaaaggttattgctagatggttaccagatgaagcacagagaccaatcgtt
gatgaagctcctgttttctctccatcattagaggagtttgaagatacacttgcatatata
gaaaaaatacgtccattagcagagccatatggtatctgtcgaatcatcccgccacccaca
tggacgcctccttgccgtcttaaggagaagactatatgggagcataccaagttccccact
cggatccagaacgtggacctgcttcagaaccgtgaacccatgaagaagaaaccaaagagc
aggaaacgcaaaaggagaagaaactccaggatgggttcctctaggagacgatctgcttct
gcttctgcttctggttcttctccctctgaacctgcttcctctcctgaggccgaggagaag
ttcggctttaactctggttcagactttactctggaagagtttgagaaatacgctcagcat
tttagagaggcttactttgagaagaaagactctgttggtgaaacgaaatggacaccgtct
gtggaggatatcgaaggcgagtactggcggatagttgaacaaccaacagatgaagttgag
gtatattatggagctgacttggagaacgtggtacttggaagcgggttttacaagaaaggg
gatagagatattgatcagtacgtagtctctggctggaacttgaataacttaccgcgtctc
cctggctctgttctctcttttgaggattgcgatatctctggtgttctagtcccatggctc
tatgttggaatgtgcttttcatcattttgttggcatgtggaggaccatcatctgtattca
ctaaattatcatcactttggggagccaaaagtatggtatggtgttccaggaagcaatgca
acagcactcgaaaagacgatgagaaaacatctacctgatttgtttgaagagcagcctgat
ctacttcatggcctggttactcaattttctccttcaattctaaaagatgagggagtccag
gtttatcgtgtggttcagaatgcaggggagtacgtactgacattcccgagggcataccat
gctggattcaactgcggtttcaactgtgcagaagcggttaatgtagctccggttgattgg
ttggctcatggacagaacgctgtggagctttacagtaaagagacgaggaagacttctctg
tctcatgacaaacttctccttggagcagcttatgaagctgtaaaggctctttgggaactc
tcagcttcttccgttggaaatgaaaacacgacaaacttgagatggaagagtttctgtggg
aagaacggaacacttaccaacgcggtccaggctcggttaaagatggaagaggaaagactt
gcagatattggtagggagtctttgagcttggtgaagatggagaaggactttgattcaaac
tgtgaaagggaatgcttctcatgcttttatgatttgcatctctctgcttctggctgcaag
tgctctcctgatgaatacgcgtgtcttaaacactcggacgatctgtgttcatgcgaagag
aaggatagatgtgtcctcctccgttacaccatggatgagttaagctcgttggtgagagca
ttggaaggggaatcagatgatttaaagatatgggcttccaaggtgttaggtgttcaacac
agtgatgaatatcaaaataagacaatttcagttaccaaggaggaggagaataagctaaag
gaaggttcgtttgatctgaacatcgacttggagttggattatctggaaaaccctaaagaa
gaagaagtcagcaccagtggcgagataaacacttcagagaacttaagtgcatcggtggag
cctataaacctcggtttcttgatttttggaaagctttggtgcaataagcatgctattttc
ccaaaaggattcacaagtcgtgtcaagttctacaacgtgcttgatccaacaagaatgagc
tattacatctctgaggttttggatgcaggactcatgggcccattgttcagggttactctg
gaagaatctccagacgagagcttcttcaatgtctcggcccaacaatgctgggagatggtg
ttgcagcgagttaaacacacatccacaaatcttggtcttactactttaccgcggcttgaa
agtattaacgggcttcaaatgtttggtctcctctcgcagtctacagttcaggccattgaa
gctcttgacccgaaccatagactcatcgagtactggaaccacaagaaccaaactcaatct
gaatcaaaagatcacttcatatcatcaaactgctccgtgagtcttaccaaaggaaaactt
ttcggagtggatttgatgtaa

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