Brassica rapa (field mustard): 103840347
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Entry
103840347 CDS
T03449
Name
(RefSeq) coatomer subunit beta'-3 isoform X1
KO
K17302
coatomer subunit beta'
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103840347
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103840347
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103840347
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103840347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_WDR35_TULP_N
WD40_like
TPR_GEMI5
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
103840347
NCBI-ProteinID:
XP_009115095
LinkDB
All DBs
Position
A01:24754835..24761624
Genome browser
AA seq
927 aa
AA seq
DB search
MPLSLDIKRKFAQRSERVKSVDLHPTEPWILASLYAGTVCIWNYQTQVITKSFEVTDVPV
RSAKFIPRKQWVVAGADDLHIRVYNYNTMDKVKVFEAHADYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRSIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYSLDRVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSLGAGYEVTDGERLPLAVKDLGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESPSKIKIFSKNFQ
ERKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQQIDVIVKNVYWAESGDLVAI
ASDTSFYILKYNRDLVSSHFDSGRPTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SSKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANEILPTIPKEQLNNVAHFLESRGMIEDALEIATDADYRFELAIQLGRLEIAKE
IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLA
KEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEAKAVETRGVYAAAEDYPTHADKSAITLVEAF
RNMQVEAEESVENGHMEHESEQVAEENGHEENEGDEEEQLEEEEKEEVNQEEGVVVDGDS
TDGGAVLVNGSEGDEEWGTNNKGNQPA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagtctcgatatcaagaggaaatttgctcaacgatcagagagagtcaaatct
gtggatctgcatcctacagagccatggatcctagcaagtttgtatgctggaaccgtgtgt
atttggaactaccagacgcaggtgataacgaaatccttcgaggtgactgatgtgccagtt
aggtcggccaagttcattccacgcaagcaatgggttgtggcaggagcggatgatttgcat
atccgtgtatacaactacaatacaatggacaaggttaaagttttcgaggcccatgcggat
tacattaggtgtgttgctgtccatcccacccttccgtatgtgctgtcatcttctgatgat
atgctcataaagctttgggactgggaaaacggttgggcctgtactcagatatttgaggga
cattcgcattatgtgatgcaagtggtgtttaacccaaaagacaccaacacttttgccagt
gcatcgcttgaccgttccataaagatatggaatcttggttccccagacccaaattttaca
ctggatgctcatcagaaaggagtcaactgcgtagattactttacggggggtgataagcca
tatttaattactggctctgatgatcatactgctaaggtttgggactatcaaaccaaaagt
tgtgtccagacgctagacggtcacacccacaatgtatctgcagtatgtttccatccggag
cttccaataatactcacaggttctgaggatggcactgttcgcatttggcacgccacgact
tacaggctagagaacacactgaattattctctcgatagagtttgggccattggttacata
aaaagctcgcgccgggttgtgattgggtatgatgaaggaaccatcatggttaaacttgga
cgagaaattcctgtcgctagcatggacagtagcggaaaaattatatgggctaagcataat
gaaatccaaactgcaaacatcaaaagtctcggtgcaggttatgaggttactgacggagaa
agacttcccttggctgttaaagacctggggacctgtgatctttatccacaaagcttgaag
cacaatcctaacgggaggtttgtggtagtctgcggtgatggagagtacataatctacaca
gctttggcttggagaaacagatcttttggttctggactggaatttgtttggtcatcggag
ggggaatgtgcagttcgagaaagcccatcaaagataaaaatattcagcaaaaatttccag
gaaaggaagagcattcggcctactttctcagctgagaagatttttggaggaaccctgtta
gcaatgtgttcaaatgatttcatttgcttctatgattgggctgaatgtaggctgattcag
caaattgatgtcattgtgaagaatgtttattgggctgaaagtggtgatttagtagccatt
gctagtgatacgtcattctacatcctgaagtacaatcgtgacttggtttcctcgcatttt
gatagtggaagaccaactgatgaagagggtgttgaggatgcttttgaggtcctccatgag
aatgatgaacgtgttaggacaggtatatgggtcggggattgcttcatttacaacaactct
tcttcgaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgt
ccaatgtatttgttaggctatattgccaatcaaagccgggtatacttggtagacaaagaa
ttcaatgtcataggatataccctgctgcttagcctcattgaatacaagacacttgtgatg
cgaggtgatttggataaagccaatgaaattttacctaccattccaaaagagcagcttaac
aatgttgctcatttcttggagtctcgaggaatgattgaagatgctttagaaattgcgaca
gatgcggactacagatttgagctggccatacagttgggtagacttgagattgcaaaggaa
atcgctgaagaagtgcagagtgagtctaaatggaagcagttaggagagttggccatgtct
tctgggaagctacaactggccgaggattgcatgaagtacgctatggatttaagtggtttg
ctactactatactcttccttgggagacgctgaaggggtgtcaaagcttgcatgccttgct
aaggagcagggaaagaacaatgtcgcctttctttgcttattcatgctgggtagattggaa
gattgtctgcagttattggtggagagcaatcggataccagaagctgctctgatggcacgt
tcttatcttccaagcaaagtttcagagatagttgctctttggaggaaagatctcagcaag
gttaattcaaaagcagcagaatctttggctgatcctgaagagtacccaaatctttttgag
gattggcaagttgctctttctgttgaagcaaaagctgtagagacgaggggagtttatgct
gctgcagaagattatccaacccacgccgataaatctgccattaccctcgtggaagccttc
agaaacatgcaagttgaagcagaggaatcagtggaaaatggacacatggaacacgagtct
gagcaggtagcagaagaaaatggtcatgaagagaatgaaggagatgaagaggagcagctt
gaagaagaagaaaaagaagaagtgaatcaagaagagggagttgttgttgatggagactca
acggatggtggtgcagtacttgttaatggaagtgagggtgacgaagagtggggtacgaat
aacaaaggaaaccaaccagcctaa
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