Brassica rapa (field mustard): 103840407
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Entry
103840407 CDS
T03449
Name
(RefSeq) auxin response factor 6 isoform X1
KO
K14486
auxin response factor
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103840407
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GFIT
Motif
Pfam:
ARF_AD
B3
AUX_IAA
BRWD_AD
TFIIA
At5g26805_C
Motif
Other DBs
NCBI-GeneID:
103840407
NCBI-ProteinID:
XP_009115164
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Position
A09:27370102..27374982
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AA seq
905 aa
AA seq
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MRLSTAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN
KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV
PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSS
VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF
RMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP
LTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMSMGMGMSSPLMWDRGLQSLNFQGMGV
NPWMQPRLDASGLLGMQNDVYQAMAAAALQDMRGIDPAKAASLLQFQNPSGFSMQPPSLM
QPQMLQQQLSQQQQQQQQLSQQQQQQSYLPVPETHQPQSQSNTLLSQQQQQQQVVDNHNQ
SASTAAAVSAMSQFGSASQSMTSLCQQQSFLDTNGGNNNPMSPLHTLLSNFSQDESSQLL
NLTRTTNSAAMTSSGWPSKRPAVDLSSFGNNSNTQSVIEQLGQSHSTSNVPPNAVSLPPF
PGGGRECSIEQEGGSPSDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTT
SNFNNDFSGGNLAMTTPSSCLDEPGFLQSSENLGSENQQSNNTFVKVYKSGSFGRSLDIT
KFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIK
ILSPQEVQQMGKRGLELLNSAPPSSNNNVVEKLPSNNGNCDDFGNRSDPRNLGNGIASVG
GSFNY
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtctactgctgggtttaatcctcaacctcatgaagttacaggggagaagaga
gttctaaattctgagctgtggcatgcttgtgctggtcctcttgtctccttacctcctgtt
ggatccagagttgtgtatttccctcaaggtcacagtgaacaggtggctgcttcgaccaac
aaagaagtggatgctcatataccaaactacccaagcttgcatcctcagcttatctgtcag
cttcacaatgtcacaatgcatgctgatgtggagactgatgaagtctacgcacaaatgact
ttgcaaccattgaacgctcaagaacaaaaagatccataccttcccgcggagttaggtgtc
ccgagtagacagcctacaaactatttctgcaaaactctgactgctagtgataccagcact
cacggtggtttctctgtgcctcgccgagctgctgagaaagtcttccctcccttggattac
tctcagcagcctccagctcaagagttgatggcgagagatctgcacgataacgagtggaag
ttcaggcatattttcagaggccaacctaaaagacacctccttactactggttggagcgta
tttgtgagtgctaaaagacttgtcgctggtgactctgttcttttcatctggaacgataag
aatcagttacttcttggtataagacgagccaatcgtccacagactgtcatgccttcgtct
gttttgtcaagtgacagtatgcatttaggccttcttgctgctgctgctcatgctgccgct
actaatagtcgcttcaccatcttctataacccaagggcaagtccttcagagtttgtgata
ccactggctaagtacgtgaaagcggtttatcacactcgcgtctctgttggcatgcggttt
aggatgctgtttgaaaccgaggaatcaagtgttcgtcggtacatgggtacaataactggc
atttgtgatctagatcctactcgttgggctaattctcactggcggtccgttaaggttgga
tgggatgagtcaactgcaggagagaggcaaccgagagtttccttgtgggagattgagcct
ttgacgacattccctatgtatccgtctccttttcctctcaggcttaaacgtccatggcct
ccaggtctcccatcttttcatggacttaaagaagacgatatgagtatgggtatgggtatg
agttcgccgcttatgtgggacagaggacttcagtctctaaactttcaaggaatgggagta
aacccgtggatgcagcctagacttgatgcttctggcttgcttggtatgcagaatgatgtt
taccaagcaatggctgcagctgctcttcaagacatgagaggcattgatcctgctaaagct
gcttcacttcttcagttccaaaacccctcgggcttctcaatgcaacccccttccttaatg
cagccacagatgctacagcagcaactctctcagcagcagcagcagcagcaacaactctct
caacagcagcagcaacagtcttatctgcccgttcctgaaacccaccagcctcaatctcag
tcaaacactcttctctctcagcagcagcagcagcagcaagtggtggataatcataatcag
tcagcctccactgctgctgctgtttctgctatgtctcagtttggttctgcttctcagtcc
atgacgtctctgtgtcagcaacaaagcttcttagacaccaacggaggaaacaacaatcct
atgtctccgctccacactcttctcagtaacttctctcaagacgagtcatctcaactgctc
aacctcactagaacaacaaactctgctgcaatgacttcttccggttggccatcaaagcgt
cctgcagttgatttatcatcgttcggcaacaacagcaacactcaatccgtaattgagcaa
ctgggacagtcccacagcacaagcaacgttcctccaaacgctgtctcgttgcctccattc
cccggtggtggtagagagtgctcaatagagcaagaaggaggaagcccctcagacccacat
agccatcttctctttggagtcaacatagattcatcttccctcttgatgccaaacggaatg
tcaaaccttagaagcattggcattgaaggtggggactccaccactcttcctttcacaaca
tctaacttcaacaacgacttctccggtggtaatcttgcaatgaccacaccttctagttgt
ctagacgaaccagggtttctacagtcctctgaaaacctcggttctgagaaccaacaatcc
aataatacctttgtgaaggtgtacaagtcagggtcttttggacgatcactagatataacg
aagtttagcagctaccacgagctgcgaagcgagcttgctcgcatgtttggcctagaaggc
cagttagaagaccctgtgagatcaggctggcagcttgtatttgtcgaccgagagaacgat
gttcttctcctcggcgatgacccttggccggagtttgtgagcagtgtgtggtgcataaag
atactgtcaccacaagaagtgcagcagatggggaaaagaggccttgagcttctcaactca
gctcctccatcctcgaacaacaacgtcgtcgagaagctcccgagcaataacgggaactgc
gatgactttgggaaccggtcagacccgaggaaccttggtaacggtattgcatccgttggg
ggttcgttcaactactag
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