KEGG   Brassica rapa (field mustard): 103840654
Entry
103840654         CDS       T03449                                 
Name
(RefSeq) cullin-3A
  KO
K03869  cullin 3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103840654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103840654
   03400 DNA repair and recombination proteins [BR:brp03400]
    103840654
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     103840654
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103840654
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 103840654
NCBI-ProteinID: XP_009115415
UniProt: M4E7C5
LinkDB
Position
A09:30450982..30453823
AA seq 732 aa
MSNQKKRNFQIEAFKHRVVVDPKYADKTWQILERAIHQIYNQDASGLSFEELYRNAYNMV
LHKFGDKLYTGFIATMTAHLKEKSKLIEAAQGGSFLEELNKKWNEQNKALEMIRDILMYM
DRTYIESTKKPHVHPMGLSLWRDNVVHSPKIHTRLLNTLLDLVHKERTGEVIDRGLVRNV
TKMFMDLGESVYQDDFEKPFLDASSEFYKVESQEFIESCDCGDYLKRAEKRLTEEIDRVG
HYLDAKSEDKITSVVEKEMIANHMQRLVHMENSGLVTMLLNDKYEDLGRMYNLFRRVTNG
LATVRDVMTSHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDKIISTAFGNDKTFQNA
SNSSFEYFINLNARSPEFISLFVDDKLRKGLKGIADADVEVVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAEKSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFYG
SHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTN
MGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAPDLKRCLQSL
ACVKGKNVIKKEPMSKDIGEEDLFCVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVE
EDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLER
DNTDRKLYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagtaatcagaagaagaggaatttccagatagaggcgttcaagcaccgcgtcgtcgtc
gatcccaaatacgccgataaaacctggcagatcctcgagcgtgccatccatcagatttac
aatcaagatgctagcggcctcagcttcgaagagctttacaggaacgcgtacaacatggtt
ctgcacaagtttggagataagctctacaccggctttatcgccaccatgactgctcatctc
aaggagaagtccaagctcatcgaggctgctcagggagggtcgtttcttgaagagctcaac
aagaagtggaacgagcaaaacaaagcgttggagatgatacgggacatcctcatgtacatg
gatagaacttacatcgagagcaccaagaagcctcacgttcatcccatggggcttagtttg
tggagggataacgtggtgcattcccctaagatacatacgaggcttctgaacacacttctt
gatcttgtccataaggaacgcaccggtgaggttattgacagggggttggtgaggaatgtt
actaagatgttcatggacttgggtgagtctgtgtatcaggatgatttcgagaagcccttt
ttggatgcttcttctgagttttataaggttgagtctcaggagtttattgagtcttgtgat
tgtggggattacttgaagagagctgagaaacgtctgactgaggagatagatagggtagga
cactacttggatgccaagagtgaagacaagattacgagtgtggttgagaaagagatgatt
gctaaccacatgcagaggctggttcacatggagaattcagggcttgttactatgctgttg
aatgataagtatgaggatttgggtaggatgtacaacttgttccgcagggttaccaacggt
cttgctactgtcagagacgttatgacctcgcatctaagggaaatggggaagcaattggtt
actgatccggaaaagtcaaaggacccggtggagtttgtacagcggctattggatgagcgg
gataagtatgacaaaatcatcagcaccgcgtttggtaatgataaaacgtttcagaacgcg
tcgaattcttcgtttgagtatttcatcaacttgaatgctcgttctcctgagttcatctcc
ttgttcgttgatgacaagctacggaaaggacttaagggtatcgcagacgcggatgtggag
gtcgtccttgataaagtcatgatgctgttccgctacttacaagagaaagatgtgtttgag
aagtactacaagcagcatttggctaaaaggcttctctccggcaaaaccgtgtcagatgac
gcagagaaaagtctgatagtgaaactaaagacggaatgtggatatcagttcacttcgaaa
ttggaaggcatgttcactgacatgaagacttcagaggacacaatgagagggttttacggc
agtcaccctgagctttctgaaggaccaacgcttattgttcaggttcttacaactggttct
tggcccacacagcctgcagtcccttgtaatctcccagctgaagtttcggttctctgcgag
aagttccgttcttattaccttgggacccataccggtagaaggttgtcttggcagaccaac
atgggcacagccgatatcaaagccatcttcggaaagggtcagaaacacgaactgaacgtg
tcgactttccagatgtgtgtcctcatgctgttcaacaactctgatcgactcagctacaag
gagatcgaacaggctactgaaatcccggcaccagatctaaaacgttgcttgcagtcgctc
gcgtgtgtgaaaggcaaaaacgtgataaagaaagaaccaatgagcaaagacataggagaa
gaagatctgttttgtgtgaacgacaagttcacaagcaagttttacaaagtgaagattgga
acagtggtggcacagaaggagacagagccggagaagcaagagacgagacagagagtggag
gaagacaggaaacctcagattgaagcagcgattgtgaggatcatgaagtctaggaaaata
ctggatcacaacaacataatagcggaggtgactaaacagttacagccacggttcctggct
aacccaacggagataaagaagagaatcgagtcgcttattgaacgtgatttcttggaaagg
gataatacggaccggaaactttaccgctatttagcctaa

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