Brassica rapa (field mustard): 103840972
Help
Entry
103840972 CDS
T03449
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103840972
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103840972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
103840972
NCBI-ProteinID:
XP_009115732
LinkDB
All DBs
Position
A09:32594156..32596700
Genome browser
AA seq
438 aa
AA seq
DB search
MKMPVDLDKSSTVSGEASVSSTGNQQNPLPKSAAKKKRNLPGMPDPNSEVIALSPKTLLA
TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSSQEVKKKVYVCPETSCVHHDPSRA
LGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVVSDWKAHSKICGTKEYKCDCGTLFSRRDS
FMTHRAFCDALAEESVRSHTHGKKQSPEILTRKKPVPDPKPSLAAAPVETQPAIAIKRPE
SPKTPREVLQETQEPTGLNGVYFDSSSASPSIYASSCSQSLFAPSSSIEPISLGLSTSHG
PSFLCSPRFPSQPAMSATALLQKAAQMGAASSGGSLLRGLGIVSSTSPSMDSIVPNGLAL
GLPCGGESSSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGGGPGSTLAGPRGGSIDAL
ATFGSGEFSGNDIGRRTS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgccggtagatttagacaagtcctccacagtctccggcgaggcaagtgtctcc
tccaccggaaaccaacaaaacccacttcccaaatcagccgcaaagaagaaacgaaacctc
cccggcatgcccgatccgaactcagaagtgatagctttatcaccgaagactctactagca
acgaacagattcgtctgcgaaatctgcaacaaaggcttccagagagaccagaaccttcag
cttcaccgtcgcggccataacttaccgtggaaactcaggcagaaatcgagccaagaagtc
aagaagaaggtctacgtgtgtcccgagacgagctgtgttcaccacgacccttcacgcgct
ttgggagatctcaccgggatcaagaaacacttttgtcggaaacacggcgagaagaagtgg
aaatgcgacaaatgctccaagagatacgctgttgtgtctgactggaaagctcattctaag
atctgtggtactaaagagtataaatgcgattgtggtactctcttctctaggagagatagc
tttatgacgcatagagctttctgtgatgctttggctgaagaaagtgtgagaagccatact
catggtaagaagcagagtcctgaaattttgacccggaagaaacctgtacccgacccgaaa
ccttccttggctgctgctccggtggaaactcagcctgctatagccattaagcgaccagaa
tctccaaaaaccccacgtgaagtcttgcaagaaactcaagagccaacaggtttaaacggt
gtttacttcgattcttcatcagcttctccaagtatatacgcgtcttcttgctcacagtct
ctattcgcgccctcttcatccattgaacccatctctttgggtctctcaacgagtcacgga
ccatcttttctctgctcaccacggtttccatctcagccggcaatgtcagcaaccgctctg
cttcaaaaggcagctcaaatgggagctgcttcttcaggtggttcattgcttcgcgggtta
ggcatagtttcatcaacttcaccttctatggactcaatagtccccaatggtctagcattg
ggactgccttgtggaggtgaaagcagctcgggtttgaaagagcttatgatggggaattca
tctgtgtttggtccgaaacaaacaacgttagactttctcgggttaggtagagcggttggt
aacggaggtggtcctggatccactctagctggaccaagaggaggcagcatcgatgcgttg
gcgacatttgggtcgggagagttttcaggaaatgacattggtagaagaacatcataa
DBGET
integrated database retrieval system
