Brassica rapa (field mustard): 103841143
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Entry
103841143 CDS
T03449
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03020
RNA polymerase
brp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103841143
09124 Replication and repair
03420 Nucleotide excision repair
103841143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103841143
03400 DNA repair and recombination proteins [BR:
brp03400
]
103841143
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103841143
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103841143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
103841143
NCBI-ProteinID:
XP_009115912
UniProt:
A0A397XZS1
LinkDB
All DBs
Position
A09:complement(33474595..33475813)
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG
YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDFLKSQFEAEVARFSNPY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccccgaccgatacgaacgattcgtcgtccctgaaggcaccaaaaaggtttcg
tatgagagggacacgaagatcatcaacgctgcttccttcacgattgagagggaagaccat
accattggcaacatcgtccgcatgcaacttcaccgcgacgagaatgtgttgtttgctgga
taccagctgcctcatcctctcaagtacaagatcatagtcaggattcacaccacaagccag
tcttctccaatgcaagcatacaatcaggctatcaatgaccttgacaaggagcttgacttt
ctcaagagccaattcgaggcagaggttgcaaggttctcgaatccgtactaa
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