Brassica rapa (field mustard): 103841165
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Entry
103841165 CDS
T03449
Name
(RefSeq) transcription initiation factor IIF subunit beta
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103841165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103841165
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103841165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
103841165
NCBI-ProteinID:
XP_009115936
LinkDB
All DBs
Position
A09:complement(33571581..33573214)
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AA seq
258 aa
AA seq
DB search
MKMEEFGAKKNENQALETDFAERPMWLMKCPSLIASALQSLPSTDDSYLPVAKVILSFDP
LAAVDEEETKFVMELARAGSGNIPKRFGLDMSKDFIPMSVFSESSSQGKMSVEGKIKNKF
HMSPRTENMESYGKLCRERATKSMCKNKQIQVIDNATGMYMWPTPGTVAPTGTFEKKKVT
TKTTEMKRTRRDRREMEEVMFNLFERQSHWTLRNLIQDTDQPEQFLKDLLRDLCIYNNKG
SNQGTYELKPEYKRSTQE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggaagagtttggggcaaagaagaatgagaatcaagctttggaaacagatttt
gcagagagaccaatgtggctgatgaaatgcccttctctcatcgcttctgctctccaatct
cttccttctacggacgattcataccttcccgtcgccaaagtcatcctctccttcgatcct
ctcgctgccgtcgacgaagaagaaaccaaattcgtaatggaattagctagggccggatct
ggaaacattccaaaacgttttggcttggatatgtctaaggatttcattcccatgtctgtt
ttctctgagtcttcttcacaaggcaaaatgtcagtagaagggaagattaaaaacaaattt
cacatgagtcctcgtaccgaaaacatggagagctatggcaaactttgccgtgaaagggct
accaagtctatgtgcaaaaacaaacagatccaggtcattgataacgccactggaatgtat
atgtggccaacaccgggaactgtagcccccacgggaacctttgaaaagaagaaagtgaca
accaagacaacagaaatgaagagaacaagaagggatcgaagagagatggaggaggtcatg
tttaatctctttgaaagacaatctcactggactctgaggaacctcattcaagatacagac
caaccagagcaattcttgaaagatttgcttagagacctttgcatttacaacaacaaaggg
agcaaccaaggaacatatgagctgaagcctgagtacaagaggtccacacaagaataa
DBGET
integrated database retrieval system
