Brassica rapa (field mustard): 103841344
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Entry
103841344 CDS
T03449
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103841344
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103841344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_EZ
TPR_Trm732_C
HEAT_2
ResIII
TPR_TNPO3_IPO13_3rd
HEAT_GCN1
UTP20
Motif
Other DBs
NCBI-GeneID:
103841344
NCBI-ProteinID:
XP_009116116
UniProt:
M4CS69
LinkDB
All DBs
Position
A09:34615213..34627805
Genome browser
AA seq
2048 aa
AA seq
DB search
MAQQQQSSRLSRLLTLLDTGSTQTTRLTAARQIGDIAKSHPQDLSSLLRKVLHYLRSKKW
DTRVAAAHAIGAIVLNVKHTSLSELLNSLATKLGEAGLSGNVDEVVASGNLQSKLLENAP
FRSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRMARQKKNLRRRLGLDMCEQFMDVN
EMIGDEDLIEQKSNVHANGVGNRLYANYSPHHIQQFVSRMVPRVAHKRPSARELNLLKRK
AKISSKDQAKGNCEGADVEMSSSHASTSKRTLSDSMDSNKANIGNEDDMEPDADGRWPFH
SFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTAEFSSDNGFDLNEDLTKVTR
EKEIDLNMQFSVNELEPLRKRPKIEDPSKSFVGNTVLEPMVSDYENSVKDEEVESLLPPV
KVNGQVNFISTKAEPESSIDGSSCQSDRNHVAEVSNHVEDKSFVEKSLLPNKNQEENIEV
LDLVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKY
MSPSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGHILPACKAGLED
SDDDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSVMNLLAEIY
SQDDMTVVMHEELSVGEGQKVDLNETVHVESVRERRDVRESPYALSGLAPRLWPFTRHDI
TSVRFSAIRTLERLLEAGCRKNISEQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECS
ERVWKLLVQCPVEDLEEAAKSYMASWIELAATPYGSTLDATKMFWPVAPPRMSHFKAAAK
MKAVQLENEASSTLGFDYARSFASLGKNEDASARSTKIIVGSDMEMSVTRTRVVTASALG
ILASRLSDRSMQFVVDPLSSTLTSLSGVQRQVASVVLISWFREIKCKVPSPSDGSGSLPG
FPTPLKKWMLDLLACSDPAFPTKDILLPYAELSRTYTKMRNEASQLLHTVETYHCFDKLL
STTKLNADSLSADETIEFASTLALWNKDSAEKESLEKQVFEDVESSRQQLLSTAGYLKCV
QNNLHITVTSLIAAAVVWMSEFPSRLNPIILPLMASIKREQEQILQQKAAEALAELIAYC
VDRKPSPNDKLIKNICSLTCMDPSETPQASIIRSIDIVDDLDFLSSRSNAGKQKSKAVLA
GGEDRSKVEGFITRRGAELALKHLSVKFGGSLFDKLPKLWECLTEVLVPVTPEDQQDFDL
KMESVSDPQVLINNIQVVRSVAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVM
TMAKSMTTNVMAAVVENAIPMLGDLTCVNARQGAGMLIGLLVQGLGVELVPYSPLLVVPL
LRCMSDVDSSVRQSVTRSFAALVPMLPLARGVPPPVGLSQDLSSNAEDAKFLEQLLDNSH
IDDYKLCTELKVTLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAER
RGLTDEPDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLRELFKNHN
VIITSYDVVRKDADYLTQFSWNYCILDEGHIIKNAKSKITSAVKQLKAQHRLILSGTPIQ
NNIIELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVM
PFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHAKQEISTIIKVDGSADSS
NVEVAPTKASTHVFQALQYLLKLCSHPLLVLGEKVTEPVASDLAAMINGCSDIITELHKV
QHSPKLVALQEILEECGIGSEASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKS
VTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTIVFMEHDWNPM
RDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQRFKVSVANTVINAENASMKTMNT
DQLLDLFASAETSKKGGASSKKGSEDNDQTAGTGKGIKAILGNLEELWDQSQYTEEYNLN
QFLAKLNG
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaacaacaatcttcgcgactcagtcgtctccttacattgttggacactggt
tcaacgcaaactacacgtctaactgcagctaggcagatcggagatattgcaaagtctcat
cctcaggacttgagctctcttttgagaaaggttttgcattacctccgtagtaaaaagtgg
gatacgagggttgctgctgctcatgctattggtgccattgtcctgaatgtcaagcatact
tcattgagtgaactcttaaattctttggcaacaaagttgggcgaggccgggttgtcaggt
aatgtagatgaagtggtggcttcaggcaatctacagtccaaacttctagaaaatgctccc
ttcagaagcttcgagatgaataaggttttagagtttggcgctttgttggcatctggtgga
caggagtacgacattttgaatgacaattccaaaaatccaagggaccgaatggctcgtcag
aaaaagaatctccggcgacgtctaggtttggacatgtgcgagcagtttatggatgtcaat
gaaatgattggagatgaggatctgattgagcaaaagtccaatgttcacgcgaatggagtt
ggaaacagattatacgcaaactattctccacatcacattcaacaatttgtttcaagaatg
gttcctcgtgtcgctcacaagaggccaagcgcaagggaattaaatctactaaaacgtaaa
gcaaaaataagctcaaaagatcaagccaaaggtaactgcgaaggagcagatgttgagatg
tcatcatctcatgcctcaacctcaaagagaactttgtctgactcaatggactctaacaag
gcaaacattggtaacgaagatgatatggagcctgatgcggatggaagatggccgttccac
agctttgttgagcaacttattcttgacatgtttgaccctgcatgggagatccgtcatggc
agtgtaatggctctgagagaaatattaatgcttcatggtggttctgctggagtgtcaaca
gcagagtttagctcggataatggttttgatttgaacgaagatttgactaaagtaacacga
gagaaagaaatcgacttgaatatgcaattttcagtaaatgagctggagccacttcggaaa
agacctaagattgaggatccatcaaaatcatttgttggtaacacggttttggaacctatg
gtgagtgactatgaaaatagtgttaaagatgaagaagttgagtctttactgccaccagta
aaggtcaatggtcaagttaactttatttctaccaaggcggaacctgaatcttctatcgat
ggctcatcatgtcagtctgatagaaatcatgttgcagaagttagcaatcacgttgaagat
aagagttttgttgagaaatccctcctacctaacaagaatcaggaagaaaatattgaagtg
ttggatttggttaaacaagctaggcattcttggatcaaaaattttgaatttctccaggat
tgcaccattcgtttcttatgtgtgctttcacttgaccgttttggggattatatttctgat
caggttgttgctcctgtgcgggaagcttgtgcccaagcacttggtgctactttcaaatac
atgagtccctcgttgatttatgagacattaaatatcttgcttcagatgcagcgccggcct
gaatgggaaattcgtcatggaagtcttttgggcatcaagtacttggttgctgtacgacag
gaaatgctccaagatttacttggccatattcttccggcgtgtaaagcagggctggaggat
tctgatgacgatgttcgagcggttgccgctgatgctcttataccggcagcagccgctatt
gtttctttgagaggacagacgttactttccattgtcatgttactgtgggatatcttgctt
gagttggatgacttaagtccatccactagcagtgttatgaacctcctggcagagatctat
tctcaagatgatatgacagtggtgatgcatgaagaattatcagtgggagagggacaaaaa
gttgatctcaatgaaacggttcatgtcgagagtgttagagaaagaagagatgttagggaa
agcccttatgcgttatctggtttagcccctaggctgtggccatttacgagacacgacatc
acatcagttcgattttctgctattcgaactctggagcgactacttgaagctggatgcaga
aagaacatttctgagcagtccaaaagttctttctggccatcttctattttaggggatacc
ctaagaatcgtctttcagaatcttttgcttgaatcaactgaggagattctggagtgttcg
gaaagagtgtggaagcttctagttcagtgcccagtggaagatttggaagaagctgcaaaa
tcatacatggcttcgtggatagaacttgcagctactccttatggctcaacattggatgct
acaaaaatgttttggccagtagctccccctcgtatgagtcatttcaaagctgctgctaag
atgaaagctgtccaacttgagaatgaagcttccagcactctgggatttgattatgcaagg
agttttgcttcccttggaaaaaatgaagatgcttctgccaggtccactaaaattatcgtt
ggctctgatatggagatgtcagtgactcgcacccgggtagttacagcatctgcgttaggt
attcttgcatcccgattgagcgatcgttcaatgcagtttgtggtagatccactgagtagt
actcttacttccttgtccggtgttcagcgccaggttgcgtcggttgtgcttatctcttgg
ttcagagaaattaaatgcaaggtcccttccccttctgatggaagtggaagtttgcctggt
tttcctactcctcttaaaaaatggatgctagatttgttagcttgctcagaccctgcattc
cccactaaagatatacttcttccttatgctgagctctcaagaacatacactaaaatgagg
aacgaagcttctcagttgttgcatacagtcgaaacctaccattgttttgataagttatta
tcgacgactaaactcaatgcggatagcttgagtgctgatgagacgattgaatttgcgtca
acactagcattgtggaataaagacagtgctgaaaaagaatccttagaaaagcaagttttt
gaagatgtggagtcatctaggcaacagctactaagtactgctggctatttaaaatgtgtc
cagaataatttacatatcacagtcacctctctgatcgctgctgcggttgtttggatgtca
gaatttccctctagacttaatccaataatcttgccgctgatggcttcaattaaaagagag
caggaacaaatactacaacagaaagctgctgaggctcttgcagaacttattgcgtactgc
gtagatcggaagcctagccctaatgacaagttaatcaagaatatttgtagcttgacgtgc
atggatcctagcgaaacacctcaagctagtatcattaggtctatagatattgttgatgat
ctggacttcctgtcctcgcgaagtaacgcaggaaaacagaagtcaaaagcagtgttggct
ggtggcgaagacaggtctaaggttgagggttttatcaccaggagaggagctgaacttgca
ttgaagcatttaagcgtgaaatttggtggttccttgtttgacaagctccctaaattgtgg
gagtgcctcactgaggttcttgttcctgtaactcctgaagatcaacaggactttgacctt
aaaatggaatctgtctctgatccacaggtcttgataaacaacattcaggttgtacgttcc
gtagcaccagtgatggaagaaactctgaaacctaggttacttagtctcttgccttgcatt
ttcaaatgcgttcgccattcccatgtggctgttagattggctgcttctagatgtgttatg
acaatggctaaatcaatgacaacaaatgtcatggcagcagtagtggaaaatgctattccg
atgttgggagatttgacatgcgtaaatgctagacaaggcgcaggaatgcttattggtttg
cttgttcaagggctgggtgtagaactggttccgtattctcctttattggttgttcccctc
ctgagatgcatgagtgatgttgacagttctgtcaggcagagcgtgacacgtagctttgct
gcccttgtacctatgcttccgttagctcgtggggttccccctcctgtagggttgagccaa
gatctatccagcaacgcagaggacgccaaatttttggagcagctacttgacaactcccat
atagatgattacaagctttgcactgaattaaaagttacactgagaaggtatcaacaggaa
ggaatcaattggttaggattcttgaaacgttttaagctccatggaattctctgcgatgat
atggggcttggtaagacgcttcaagcatctgcaattgtggcatctgatgcagcagagcgt
cgtggcttaacagatgaaccagatgtttttccatctataattgtttgcccttcaacacta
gttggccactgggcgtttgaaattgagaagtatatcgacctttctctgctaagcgtgttg
cagtatgttggctctgcccaagaccgcgtttctctccgtgagctgttcaagaaccacaat
gtcattatcacatcttatgatgtggtccgcaaggatgctgattatctgacacaattctca
tggaactattgtattctggatgagggccacattattaagaatgcgaaatctaaaattact
tcagcagtgaaacagttgaaagcccaacaccggcttatcctcagtggaacgccaatacag
aataatatcatcgagctgtggtccctttttgactttttaatgcctggatttcttgggaca
gagagacagtttcaagcatcttatggaaaaccgttgctagctgctagagatcctaaatgc
tctgccaaggatgctgaagcgggtgtactggcgatggaagcactccataagcaagttatg
ccattcttattgcggcgtacgaaagaggaagtcctctctgacctgccagaaaaaatcata
caggacagatactgtgaccttagtcctgtccagttgaagctttatgagcagttttctggt
tcgcatgctaagcaagaaatatctactatcataaaagttgatggatcagcagattcaagc
aatgtggaagtcgcgccaacaaaagcatccacacacgttttccaggcgctgcagtacctg
cttaaactctgcagtcatccgcttcttgttcttggcgaaaaggttacagagccggtggct
tctgatttagcagcaatgataaatggatgttcagacattatcactgagcttcataaagtt
caacactcgccaaagcttgttgcccttcaagaaattttagaagaatgtggtataggttct
gaagcgtctagttcagatggaactctaagtgtaggccagcatagagttctgatatttgca
cagcacaaagctttgctggacattattgaaaaagacttgtttcaagcccacatgaaaagc
gtcacatatatgcgactggatggttcagttgtacccgagaaaaggtttgagattgtgaag
gcttttaactcagatcccacaattgatgttctacttctgacaacacatgttggtggactt
ggattgaacctgacctctgctgacacgattgtatttatggagcatgattggaatcctatg
cgtgatcatcaggcgatggatagagcgcatagattgggacagaagagagttgtaaatgta
caccgtctcataatgcgtggaacactggaagaaaaagttatgagtctccaaagattcaaa
gtatcggttgccaatacggtgatcaatgctgagaatgctagtatgaagacaatgaacact
gatcagttgctagacttatttgcttcagctgaaacttcgaaaaagggtggtgcgtcttcg
aagaagggatcagaggataatgatcagactgctggaactgggaaaggaatcaaagcaatt
ctgggtaacttggaggaactgtgggatcaatcacagtacacggaggagtacaatcttaac
caattcttagctaagctaaacgggtag
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integrated database retrieval system
