Brassica rapa (field mustard): 103841370
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Entry
103841370 CDS
T03449
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103841370
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103841370
Meiosis-specific proteins
Cohesin complex and associated proteins
103841370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_29
AAA_21
ABC_tran
AAA_15
AAA_27
Laminin_II
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
103841370
NCBI-ProteinID:
XP_009116144
LinkDB
All DBs
Position
A09:34746260..34764888
Genome browser
AA seq
1219 aa
AA seq
DB search
MPAIQSPPGRILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRT
GQLRGSQLKDLIYAFDDREKEQRGRKAFVRLVYLLDDGVELRFTRTITSSGGSEYRIDNR
VVNWEEYNAKLRSIGILVKARNFLVFQGDVESVASKNSKELTGLLEQISGSDELKKEYEE
LEEKKAIAEEKAALIYQKKKTIGAEKKLKKAQKEEAEKHLKLQDELKALKREHFLWQLYN
IENDIEKANEDVDAEKNNRKDVMAKLEKFEHEAGKRKIEQAKYLKEIAQREKKIAERSSK
LGKYQPELLRLKEEIARIKSKIESSRKEVDKRKKEKGKHSKEIEQMQKSIKDLNEKMNEL
NERRQDSSGKLPMLDSQLQEYFRIKEEAGMKTIKLRDEKEVLDRQYHTDLEALRNLEENY
QQLINRENDLDEQIERMKSRQKEIEDSSSEYKNETTSLKKQLRSLQEKHRDARNASENLK
TRIAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAVT
VAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKPVLERLRNLDGTAKLA
FDVIQFDPELEKAVLFAVGNTLVCDDLDEAKRLSWTGERFKVVTVDGILLTKAGTMTGGT
SGGMEAKSNKWDDKKIEGLMKKKEEYELELEKVGSIRDMQIKESEISGKISGLEKKIQYA
EIEKKSIKDKLPHLEQEKRNITEESRRINVELSKSRAEVDKRNTEIRKLEKRINEIVDRI
YRDFSQSVGVANIREYEEKQLKEAQEVAEERLNLSNQLAKLKYQVEYEQNRDVGSRIRKL
ESSISSLETDLEKIQKRKSELKELTEKATNEINNWKKEMGECKQKSEEYEKEILDWKKQA
SQATTSITKLNRQINSKETQIEQLISQKQEIAEQCELERIALPVLSDAAEEEDDSDGPQY
DFSELDRAHLQERRPSARDKMDAEFRQKIESKSSEIERTAPNLRALDQYEAIQEKEKQVS
QEFEAARKEEKQVADAYNTVKQKRYELFMEAFNHISSIIDKIYKQLTKSNTHPLGGTAYL
NLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEV
DAALDNLNVAKVAQFIRSKSCQAARDNQDAEDGHGFQSIVISLKDSFYDKAEALVGVYRD
VDKSCSSTMSFDLRNYAES
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatccaatccccgccggggaggatcctgcagctcgagatggagaatttcaag
tcctacaaaggtcaccagctagtaggccccttcaaggacttcacggcgatcatcggtccc
aacggcgccggcaaatccaacctaatggacgctattagcttcgtcctcggagttcgcacc
ggtcagcttcgtggatctcagcttaaggatctgatctacgcgttcgacgatcgagagaag
gagcagagagggaggaaagcgttcgttcgccttgtctatctccttgacgacggagtggag
cttcgtttcactcgtacgattactagttctggtgggagtgagtatcggattgataataga
gttgtgaattgggaagagtacaatgcgaagctgagatctatagggatacttgttaaggct
cgtaacttcttagtgtttcagggtgatgttgaatctgttgcttcgaagaattcgaaagag
ctcactggacttctcgagcagatctctggctctgatgagcttaagaaagagtatgaggag
ttggaagagaagaaggccatcgctgaagagaaagcagctcttatataccagaagaagaag
acgattggggctgagaagaagctgaagaaagcgcagaaggaagaagctgagaagcatcta
aagctgcaagacgaactgaaagctttgaagagggaacattttctgtggcaattatataac
attgagaatgatatcgagaaggcaaatgaagatgttgatgctgaaaagaacaatcgtaag
gatgtcatggcgaagctggagaagtttgagcatgaagctggtaagagaaagatagaacaa
gctaagtatttgaaagaaattgctcaacgtgaaaagaagattgctgagagaagctccaag
cttggaaaataccaacctgagcttctgagattgaaggaggagatagctcgcataaaatca
aaaattgagagcagtcgaaaggaggtggataagaggaaaaaagaaaaagggaagcattcc
aaagaaattgaacagatgcagaaaagcatcaaggatctgaatgagaaaatgaacgaatta
aacgagaggagacaagatagcagtggaaagctcccaatgcttgacagtcaactgcaagag
tattttcgaataaaagaagaagctgggatgaaaaccattaagctaagagatgaaaaagag
gtgctagataggcaatatcatactgatctcgaagcactgagaaatctggaagaaaattac
cagcaactgataaatagggagaatgatcttgatgaacaaattgagcgaatgaaatccagg
caaaaagagattgaagattcatcctcggaatataagaacgaaacaactagtctaaaaaag
cagttacgatcactgcaagaaaagcaccgagatgccaggaatgcatctgagaatctgaag
actagaatcgcagagttagaagatcagttaagtgatctaacggctgaaagatatgaaaat
gagagagatagcaggctaacgcaggctgttgagtctctcaagcgtctattccaaggagtt
catggtcgaatgactgatctgtgtcgaccaaatcggaagaagtacaaccttgcagttact
gttgctatggggcgatttatggatgcagtagttgtagaagatgaaaacacaggaaaggac
tgcatcaagtacttgaaagagcaaaggcttcctcctatgacatttattcctcttcagtca
gtacgtgtcaagccagtgcttgaaagattaagaaatttggacggcacagcaaagctggcg
ttcgatgttatccagttcgatcctgaattagagaaggcggtcctctttgctgttggaaat
actctcgtctgtgacgaccttgacgaagccaagcgtcttagctggactggagagagattt
aaagttgttactgttgatggcatactactcacaaaggcgggaacaatgactggtggtacc
agtggtggaatggaagcaaagtctaacaaatgggatgacaaaaaaattgaaggactgatg
aaaaagaaagaagaatatgaactggaactggaaaaggttggatctattcgagatatgcag
ataaaggagtccgaaatatcgggtaaaataagtggacttgagaaaaagattcagtatgcc
gaaatcgagaagaaaagcatcaaagacaaacttccacatcttgagcaagagaagcggaat
attactgaagaaagtagacgcataaatgttgaactttctaagtcaagagctgaggttgat
aagaggaatacagaaatcaggaagttggagaaaagaatcaatgagattgtggaccgtatc
tatagggattttagccagtctgttggtgttgctaatatacgtgaatatgaagaaaaacag
ctcaaggaggctcaagaagtggctgaagaaaggctgaatctgagtaaccagcttgctaag
ttaaaataccaggtggaatatgagcaaaaccgagatgtggggtcacgaattcggaagcta
gaatcttctatcagttctttggaaactgatttggaaaaaatacagaagaggaagtctgaa
cttaaggagttaacagaaaaagctactaatgaaatcaacaactggaaaaaggaaatggga
gagtgcaaacaaaaatcagaagagtatgaaaaagaaatcctggattggaaaaagcaggct
tctcaagcgacaactagcataaccaaactcaatcgtcagataaattctaaggaaacccaa
attgagcagctgatctcgcaaaaacaggaaatagctgagcagtgtgagcttgaacgtatt
gcccttcctgttttatcagatgctgcggaggaggaagatgactcagatgggccacagtat
gactttagtgagttggatagagctcatctccaagaacggagaccatctgctcgtgacaaa
atggatgcggaatttaggcaaaaaatagaatctaaatcgtcagagattgaaagaacggcc
ccaaacttgagagcacttgaccagtatgaggctatacaagagaaagagaaacaagttagc
caagagtttgaagctgccaggaaggaggagaaacaagtagcggatgcatacaatactgtt
aagcagaagaggtatgagctatttatggaagcgttcaatcacatttctagcatcattgac
aagatctacaaacagctaaccaagagtaacacgcatccactgggtgggactgcttatcta
aacctagagaatgaggatgatccgtttctacatggtataaagtatactacaatgccccca
acaaagcgtttccgtgacatggaacagctgtctggaggggagaaaacagttgcagctttg
gcattgctcttctccatccatagctataggccttcgccctttttcatactggatgaagtg
gatgctgcgctcgataatttaaacgttgcaaaagtcgctcagtttattcgtagcaaatcc
tgccaagcagcacgtgacaatcaggatgcagaggatgggcatggcttccaaagcattgta
atatctctcaaggacagcttctatgacaaggccgaagctctggttggagtttacagagac
gtcgataagagttgctcgagtacgatgtcttttgaccttaggaactatgcagagtcgtga
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