KEGG   Brassica rapa (field mustard): 103841551
Entry
103841551         CDS       T03449                                 
Name
(RefSeq) autophagy-related protein 18d
  KO
K22991  WD repeat-containing protein 45
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103841551
Membrane trafficking [BR:brp04131]
 Autophagy
  Other autophagy associated proteins
   Others
    103841551
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT140_2nd Beta-prop_RSE1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 WDR55 CFAP251_N WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_EML NBCH_WD40 RMC1_N Beta-prop_WDR19_1st RicinB_lectin_2
Other DBs
NCBI-GeneID: 103841551
NCBI-ProteinID: XP_009116347
LinkDB
Position
A09:35749222..35752070
AA seq 387 aa
MTSTVYNSQGILQPRGFTSPEPGFGDSDGAELVSVSWNQDYSCFSSGTSHGFRIYNCEPF
KETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQSRCISEFSFRSE
IRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIENLANPRGLCCLSHHMNTSVLACPGVR
RGEVRVEHFGLNMVQIINAHDANIACMTMTLDGLLLATASTKGTLIRIFNTMDGTRLQEV
RRGTDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVSGEDSHSNEHETSSNSLQALV
TPASGVNPGSSLSFLRGVLPRYFSSEWSFAQFHVPEVTQFFAAFGAQNTIAIIGMDGSFY
RCSFDPVNGGEMTQLEYVRFLKPGTLK
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgacttcaactgtttacaactcgcaagggatcctccaaccacgagggtttacgtctcca
gagccaggttttggtgacagtgatggagcagagttggtttctgtttcttggaatcaggat
tacagctgtttttcttctgggaccagccatggtttccggatatataactgcgagcctttc
aaggaaactttcaggcgagagctcaaggatgggggttttaaaatcgtggagatgcttttc
cggagtaatatcttggcgctcgttggcggtggacctaactctcagtacccttcgaacaaa
gtattgatttgggatgatcatcagagccgctgcatcagtgagttttcgttcaggtcggag
attcgtgcagtgaagttaagaagggatcggattgttgttgttcttgaacacaagatatat
gtctacaattttatggacctgagacttcttcatcagattgaaaacctggcgaatccgaga
gggttgtgctgcctctctcaccatatgaatacatctgtgctggcttgtccaggtgttcgt
cgaggagaggtccgtgttgaacattttgggcttaacatggtacagatcattaacgctcat
gacgccaatatcgcgtgcatgaccatgacactggatggattgcttcttgcaactgccagt
acaaagggaactctgattagaattttcaacacaatggatggaactcgtctgcaagaggtc
cgaagaggaacggacagagcagatatctatagcattgctctttcaccgaatgtgcagtgg
ctggcagtatcaagcgacaagggaactgttcatattttctctcttagagtgagggtttct
ggagaggactcgcactccaatgaacacgagacgtcttcaaattccctgcaggctcttgta
actccagccagtggtgtcaaccctggttcgtcattgtcatttctgagaggagttctgcca
aggtattttagctcggagtggtcatttgctcagttccatgtaccagaagtcacccaattc
tttgcagcatttggtgctcagaacacaattgctattatcggcatggatggaagtttctac
aggtgcagcttcgatccagtgaacggaggagagatgactcagcttgaatacgtccgcttt
ctgaagccggggaccctaaaatag

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