KEGG   Brassica rapa (field mustard): 103841559
Entry
103841559         CDS       T03449                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103841559
   04121 Ubiquitin system [BR:brp04121]
    103841559
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103841559
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    103841559
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103841559
SSDB
Motif
Pfam: zf-RING_2 Zn_ribbon_19 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_11 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 Rad50_zn_hook DpnI zf-FPG_IleRS zf-C3H2C3 zf-HC5HC2H DUF7815 Zn_ribbon_IFT122_C zf-Nse VPS18_RING_C
Other DBs
NCBI-GeneID: 103841559
NCBI-ProteinID: XP_018510024
UniProt: M4CSR1
LinkDB
Position
A9
AA seq 310 aa
MSGRNTHWCHRCQRGVYLRGPDSFCTYCGGGFVEEIDVSPFRAHRDLERGPTYDLMEAFS
AFMRSRLAERSHDTGRITASSGGGGGSESFSSIAPFLIFGGQANNTSVEALLNTSPGGIG
ITRGGNVNAGDYFYGPGLEELIEQLSSGTTHHRGPPPAPKSSIDALPTVKITQKHLKSSD
SHCPVCKEEFELKSEAKQMPCKHMYHSDCIVPWLVQHNTCPVCRKELPSRGSSSSTERDQ
NRGSNRRRNVFSSLWPFRSSSSSSTQNRRDTSNAATVEEGGQYNHHQQLQHQQQHEQQSH
MGYSGWPFDY
NT seq 933 nt   +upstreamnt  +downstreamnt
atgtctggtcgaaacactcattggtgccacagatgtcaacgtggcgtctacctacgcggt
ccagattctttctgcacctattgtggaggagggtttgtcgaagaaatcgatgtatctccc
tttagagctcacagggatctcgaacgtggtccaacgtatgatctcatggaagctttctca
gctttcatgagaagccgcttagccgaaagaagccacgacacgggaagaatcaccgcctct
tctggtggtggaggtggttccgagagcttctcgagtatagctcctttcttgatcttcggc
ggccaagcgaacaacacttcggtcgaagccttgctgaacacttcccctggtggtattggt
atcactcgtggcggcaacgttaatgctggcgactacttttacggaccaggtcttgaagaa
ctgatcgagcagctttcgtctgggactacgcaccatcgtggtccaccgcctgcgcctaag
tcgtctatcgatgcgttgccgacggttaagatcacgcagaagcatctcaagtcgtctgac
tctcactgtccggtttgtaaagaggagtttgagttgaagtcggaagcgaaacagatgccg
tgtaagcatatgtatcattctgactgcattgttccctggctggttcagcataacacgtgt
ccggtgtgtcgtaaagagttgccgtcgagagggtcgtcttcaagcacagagagggatcag
aatagaggcagcaacagaagaaggaacgttttctctagtctgtggccgttcaggtcgtct
agctcaagctcgacgcagaaccggagagatacaagcaacgcagctactgtggaagaagga
gggcagtataatcatcatcaacagctacaacatcagcaacaacatgaacaacagtcacat
atgggttatagtggatggccttttgactattaa

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