KEGG   Brassica rapa (field mustard): 103841585
Entry
103841585         CDS       T03449                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103841585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103841585
   03041 Spliceosome [BR:brp03041]
    103841585
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103841585
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103841585
Spliceosome [BR:brp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103841585
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 PHM7_cyt
Other DBs
NCBI-GeneID: 103841585
NCBI-ProteinID: XP_009116386
UniProt: M4CST5
LinkDB
Position
A09:complement(35877891..35880536)
AA seq 449 aa
MTKKRKLEAQLSEASEPSEKQIAINNEVKQEVEYEEVEEEHEDDDDNDEEEENDNRMVVA
ATSGSGNLDDDDDEPIQDLLEPFSKEQLLNLLKEAAEKHHDVANRIREVADEDPVHRKIF
VHGLGWDTKTETLIEAFKEYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGARNALKQPQK
KIGSRMTACQLASKGPVFGGNNPVAAAGASIAPAQHSNSEHTQKKIYVSNVGAELDPQKL
LAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESAKKALEEPHKSFEGHILHCQKAI
DGPKPGKPQQFNNNPRFQRNDNSGGYGTPAGHGHLMAGNQAGMGAPVQAMNPAIGQALTA
LLASQGGLAFNPAIGQALLGSLGAAGGVNPGAGVGMPTGYGTQPMTPGSIPGYGGQPGLQ
GGYQTPPPGQGGAGRGQHGVGHYSSYMGQ
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgactaagaagagaaagctcgaagcgcagctcagcgaggcttctgagccgtcggagaag
cagatcgcaattaacaatgaggttaaacaagaagttgaatacgaggaagtagaggaagag
cacgaagatgacgacgataatgatgaggaggaggaaaacgataatcgcatggtggtggcg
gcgacgtctggatctgggaatctagatgacgacgacgatgagccgattcaagatctgttg
gagccgttttcgaaggaacagctgctgaatcttctcaaagaagctgcggagaagcatcac
gatgtggctaatcgaatccgcgaagtggctgacgaggatcccgttcatcggaagatcttc
gtgcacggacttggatgggacaccaaaaccgagacgctgatcgaagctttcaaggagtac
ggagagatcgaagattgcaaggctgtgtttgataaggtctcggggaaatctaaaggatat
ggctttattctgtttaagtctagatcaggtgctcgcaacgcgttgaagcagcctcagaag
aagattgggagtcgtatgactgcgtgtcagttagcttctaaaggaccagtctttggagga
aacaaccctgtggctgctgcaggtgcctctattgctcctgctcagcattcgaactctgag
cacacgcagaagaagatctatgttagtaacgttggagcagagctggatccgcagaagctg
ctagcgtttttctcgaagtttggggagattgaggaaggtcctttgggtcttgataagtat
actgggagacctaagggcttctgtctgtttgtgtataagtcagctgaaagcgccaagaag
gccttagaggagccacacaagagctttgagggccacatcttgcactgccagaaggctatc
gatggtcctaaacctggcaagccgcaacagtttaacaacaatcctcgtttccagaggaat
gataacagtggtggttacggtactcctgctggtcatggacatctcatggctggtaaccaa
gccgggatgggtgctcctgttcaagcgatgaacccagctattgggcaggccttgacagct
ttgttagcatcgcagggaggtttggcgtttaacccagctattgggcaggctttgttgggt
tctctgggggcagctggaggtgtaaacccaggggctggagttggaatgccaactggttat
ggaactcaacctatgacacctgggagtattcctgggtacggtggacaacctgggttgcaa
ggtggctatcagacccctcctcctggtcagggtggtgcaggaagaggacaacatggtgtc
gggcattactcttcttacatgggccagtag

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