Brassica rapa (field mustard): 103842054
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Entry
103842054 CDS
T03449
Name
(RefSeq) nodal modulator 1
KO
K26500
BOS complex subunit NOMO
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103842054
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
103842054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOMO1-like_2nd
CarboxypepD_reg
DUF7152
NOMO1-like_1st
NOMO_8th
SdrD_B
Ig_NOMO
CarbopepD_reg_2
NOMO_3rd
NOMO1-like_9th
SpaA
EMC7_beta-sandw
NOMO_5th
NOMO_6th
Y_Y_Y
MetallophosN
DUF1416
fn3
CooC_C
Big_7
Motif
Other DBs
NCBI-GeneID:
103842054
NCBI-ProteinID:
XP_009116907
UniProt:
M4CTY1
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All DBs
Position
A09:complement(37979994..37987097)
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AA seq
1197 aa
AA seq
DB search
MAANTKLLHSLIIFLIATSTVYNVSADSIKGCGGFVEASSSLVSSRKGADGKLDYSHITV
ELQTVDGLVKDSTQCAPNGYYFIPVYDKGSFTLKINGPEGWSWSPDKVPVVVDDSSCNNN
EDINFRFTGFTLSGKVLGAVGGESCMIKNGGPADVNVELLSSDGDPIASVLTSSDGSYLF
KNIIPGKYSIRASHPELQVEVRGSTEVELGFANGLVDDIFFVLGYDLKGSVVAQGNPILG
VHIYLHSDDVSMVDCPQGLGDASGERKPLCHAISDADGIFSFKSIPCGKYELIPHYKGEN
TVFDVSPPVMPVSVEHQHVNVPTKFQVTGFSIGGRVVDSNLKGVEGVKIVVDGNLRSVTD
NEGYYKLDQVTSNQYTIDAVKEHYKFDKLKKFMVLPNMASLPDISAVSYDVCGVVRMFGS
GHKANVALTHGPTNVKPQKKLTDESGKFCFEVPPGEYRLSAFAATPKSAPELLFLPGYMD
VSVKSPLLNIEFSQARVNVHGSVTCKEKCVPSVSVALVGAAGDRDKKTVVLTDESSQFHF
SDILPGKYRVEVKSISPEAISEEDTWCWDRSSIDVNVGTEDIKGIEFVQKGYWINIVSTH
EVDAKIVHPSGSPTNLKIKKGLQKICVESPGAHELQLSDSCISFASNSIKIDVSNPQPIH
LRAEKYLIKGLINVESSSTEIESELPESFIVDMQDEEGRVINSISAKLASVGSGVYEYYT
WAKLGEKISFVPRDSRGNAEKKMLFYPKELRAVVANDGCQAAVSPFAGRPGLYIQGSVSP
PLPGVNIKVSAGKDSHISSLKKGEVAVETSTSPDGSFVAGPLYDDIPYDTDASKPGYHIK
RLGPYSFSCQKLGQISVRVSSKDNAETSIPPLLLSLSGDHGYRNNSISGAGGLFVFDSLF
PGNFYLRPLLKEYSFKPSTLAIELGSGESSEVVFEATRVAYSAMGRVALLSGQPQEGVAI
EARSDSKGYYEETTSDIDGNYRLRGLHPGATYVIKVSKRNGSGKNNIERASPESVSLQIG
YEDIHGVDFLVFEQPETTILTCHVEGKQHEEINTNLLVEIKSASDVSKIENVFPLPLSNF
FQVKGLSRGKHLVQLKSNRPLGSHKVVSEIIEVDFETNAQIHVGPLRYSIEADQQSQEVT
PAAILPLVTGIAAIALFISIPRLKDIYQSTVGFSAPGFSASSTKREPRKAVARKKTF
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatacgaagcttcttcattctctgatcatcttcctcatcgcgacctccacc
gtctacaacgtttccgcggattcgataaaaggctgcggtggttttgtcgaggcgagttcg
tctttggtcagctctcggaaaggagcagatgggaaacttgattattctcacatcacggtt
gaacttcaaacagtagatggattggtgaaggacagtacacagtgtgcccctaatggttac
tatttcatccctgtctatgacaagggttcattcactctcaagattaatggacctgaagga
tggtcatggagtccagataaggttcctgttgtcgttgacgactctagttgcaacaacaat
gaggatattaacttccgcttcacgggttttacattatctggtaaagtccttggagctgtt
ggtggggagagttgtatgattaagaatggaggccctgctgatgttaatgttgaattactg
tcttctgatggagatcctattgcttctgttctcacgtcatcagatgggagctacttgttc
aagaatattattccaggaaaatacagtatccgtgcatcccatccagaactgcaagttgaa
gttcgcggttcaacagaggtcgaacttggatttgcaaatggcttggtggatgacatattc
tttgtccttggttatgatctcaagggatctgttgttgctcagggaaatccaatcctggga
gttcatatatatttgcattcagatgatgtttccatggtagattgtccccaaggacttggt
gacgcttctggagaaaggaagcctctctgccatgctatatctgatgcagacggaatattc
agtttcaagtccatcccatgtggaaaatatgaactgataccgcattataagggcgagaac
acggtctttgatgtttcacctcccgtgatgcctgtttctgtagagcatcaacatgtcaat
gttcccacaaagtttcaggtaacaggtttctccatcgggggccgagtagttgacagtaac
ttaaagggagtcgagggcgttaaaatcgtagtagatggtaatcttagatctgtcacggac
aatgaaggttattacaagcttgatcaggttacatcaaatcaatatacgatagatgcagtc
aaggagcattacaaattcgacaaactgaagaagttcatggtcttaccaaatatggcttca
cttccagatatcagtgccgtgtcttatgatgtctgtggtgtggtgcgaatgtttggttct
ggtcacaaggcaaatgtagctttgactcatggacccacaaatgtcaaaccgcaaaagaag
cttacagatgagagtggaaagttctgctttgaggttccaccaggcgaatataggctgtct
gctttcgctgcaacaccaaagagtgctcctgaacttctgtttttgccaggttatatggat
gtttccgtcaaaagtccattgttgaacattgaattttctcaggcccgagtcaatgtgcat
ggttctgttacgtgcaaggagaaatgtgttccgtctgtctcagtggcgcttgtgggagca
gctggcgatcgtgacaagaagacagttgttttaaccgatgagagcagtcaatttcacttt
tcagacatattgcctggaaagtatagagttgaggtcaaaagcatttcaccggaagccata
tccgaggaagacacttggtgctgggaccgtagctccattgatgtgaatgtcggaacggag
gatattaaagggatcgaatttgtccagaaaggttactggattaatattgtcagtactcat
gaggtggatgctaaaattgttcatcctagtgggtcacctactaatttgaaaatcaagaaa
ggtttgcagaaaatatgcgttgagtcacctggagcgcatgagcttcagctttctgactcc
tgcatatcctttgcgagcaattcaataaagatagatgtctcaaatccacagcctattcat
ctgagagcagagaagtatctcatcaaaggtttgataaatgtggagtctagctcaaccgag
attgaatctgagttgccagagagtttcattgttgatatgcaagacgaggaaggaagagtt
atcaacagtatttctgccaaacttgcatcggttgggagtggcgtgtatgagtactataca
tgggcaaagcttggtgaaaagattagctttgttcctcgggattctaggggtaacgcggag
aagaagatgttgttttatccgaaagagcttcgtgcggtagtggcaaatgatggttgtcaa
gctgctgtttccccgtttgctggtcgacctggtctttacatacaaggatccgtctctccc
cctcttcccggtgtcaacattaaggtctctgcaggaaaagacagccatatttcttcactt
aagaaaggtgaagtagctgtcgaaacaagcacatcgccagatggctcttttgttgctggg
cctttgtatgatgatataccatatgacaccgatgcttcaaagcctggctaccatattaaa
agactaggaccatattccttctcctgccagaagcttggccagatctctgtccgtgtttct
tcaaaggacaacgccgagacatcaatccctccattgttgttatcattgagtggcgatcat
ggttacagaaataattctatatctggcgctggtggactctttgtatttgatagcttgttt
cctggaaatttctacttgcgcccccttcttaaggaatattctttcaagccctcaacactg
gcaatagaactgggttctggggagtccagtgaagttgtctttgaggctactcgtgttgcc
tacagtgcaatgggtagagtcgctctcctatctggccaaccacaagaaggcgttgcaatt
gaagctcgctctgattccaaaggatactatgaggagaccacaagtgatattgatggaaat
taccgtctgagagggttacatcctggtgcaacatatgtaatcaaggtatcgaaaagaaat
ggttcaggcaagaataatatcgaacgtgcgtctccagagtctgtttctcttcagattggt
tatgaagatatccacggggtagactttttggtctttgaacaaccagaaacgaccatatta
acatgccatgtagaaggaaaacagcacgaagaaataaacacgaacctgctagtggagatc
aaatcagccagtgatgtatctaaaatagagaatgtctttccgctgccactttccaacttc
ttccaagtaaaaggcttgtccagaggtaaacaccttgtgcagcttaaatccaaccgtcct
ttaggctcccataaagtagtgtcagagatcatcgaagtggatttcgagacaaatgctcaa
atccatgtcggtccacttcgatacagcatcgaggcagatcagcagagtcaggaagtgact
cctgcagctatattgccactggttactggcattgcggcaattgctctgttcatcagcatc
cccaggttgaaagacatctaccaatccactgttgggttttcggctcccgggttcagtgca
tcatctaccaagagagaacctcgaaaagctgttgctagaaagaagacgttctga
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