KEGG   Brassica rapa (field mustard): 103842117
Entry
103842117         CDS       T03449                                 
Name
(RefSeq) RAN GTPase-activating protein 1
  KO
K14319  Ran GTPase-activating protein 1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103842117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103842117
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103842117
SSDB
Motif
Pfam: LRR_NLRC3 WPP LRR_CARMIL LRR_6 LRR_TMOD-LMOD LRR_1 LRR_NLRC4 LRR_MHP1-HER1-GIP3 LRR_NXF1-5
Other DBs
NCBI-GeneID: 103842117
NCBI-ProteinID: XP_009116980
UniProt: M4CU36
LinkDB
Position
A09:38264120..38266443
AA seq 535 aa
MDHSVKTPPVLSVKMWPPSKSTRLMLVDRMTKNITTPSIFSRKYGLLSLQEAEEDAKRIE
ELAFATANKHFQSEPDADGTSAVHVYAKESSKLMLEVIKRGPQQVDSEAEGNVDGDTLFD
LSGGRRAFIDLEEARELLRPLAEPNNSFTKIRFSNRSFGSEAAKFAVGVLSSVKDQLTEV
DLSDFVAGRPEAEALEVMTMFSSALEGSNLRSLNLSDNALGEKGIRAFASLIKSQRGLEE
LYLMNDGISEDAARAVRELLPSTGEIRVLQFHNNMTGDEGAIAIAEIVKQCPSLEDFRCS
STRIGSDGGVALAEALASCSRLKKLDLRDNMFGVEGGVALAETLSVLSELTEIYMSYLNL
EDEGAEALSEALVKSAPRLEVIELAGNDVTVKAAGKLAECIASKESLSKLNLSENELKDE
GTILIAKALEEGHDQLTEVDLSTNMMRRAGARALAQTVLKKPTLKLLNINGNFISEEGVD
EVSDMFKDSPDKLGPLDDNDPEGEDFEDEDEEEEGEEESELEAKLGGLKIKQEEE
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggatcattcagttaaaaccccacctgttctatccgtaaagatgtggccaccaagcaag
agcacacgcctcatgctcgtcgaccgcatgaccaagaacatcaccaccccttccatcttc
tcccgaaagtacggtctcttgagcctccaagaagctgaggaggacgccaagcgcattgaa
gaacttgctttcgccaccgccaacaaacacttccagagcgagcctgacgctgatggcacc
tctgctgtccacgtctacgccaaagagtccagcaagcttatgctcgaagtcatcaaacgt
ggtccgcaacaggttgattccgaggccgaggggaacgtcgatggggacaccttgtttgat
ttatctggtggacgtagagccttcattgatctagaggaggcgcgcgagcttctgaggcct
ctcgctgagccgaacaactccttcaccaagatccgtttcagcaacaggagcttcggctcc
gaggctgctaaattcgctgtaggcgtcttgtcttccgtcaaggaccagctgaccgaagtg
gatctctcggacttcgtcgcggggagaccggaggcggaagccctcgaagtcatgaccatg
ttttcgtccgccttggagggctctaacctcaggtctttgaatctttccgacaacgccttg
ggagagaaaggcatccgtgcgtttgcctctctcatcaagtctcagcgtggcttggaggag
ctttacctcatgaacgacggcatttcggaggatgctgcgagagcggtccgcgagctgctt
ccatctactggcgagatcagggttcttcagtttcataacaacatgactggagacgaagga
gccatcgccattgcggagattgtgaagcagtgtccgtctctggaggatttcaggtgttcg
tccacgaggattggctctgacggaggtgttgcgcttgctgaagcgcttgcgtcatgtagc
cgcttgaagaaacttgatctccgtgacaacatgtttggagttgaaggtggggttgccctg
gcagagaccttgtcagtgttgagtgagttgactgagatctatatgagttacctgaacttg
gaggatgagggagcagaggcgctttccgaagctctggttaagtctgctcctcgtcttgaa
gttatagagttggctgggaatgatgttactgtaaaagccgctgggaaactggcggaatgc
atcgcgtccaaagagtctctttcgaagctgaatctgtctgagaatgaactcaaagacgaa
gggactatcttaatcgcaaaggcgcttgaagaaggtcatgaccagttgactgaagttgat
ctgagcaccaacatgatgaggagagctggggcgagggccttggcgcaaactgttttgaag
aaacctactttgaagcttttgaacatcaacggaaacttcatatctgaggaaggtgtggac
gaggtgagtgacatgtttaaggactcaccggacaagcttggtcctctggatgataatgac
ccggaaggagaagattttgaagatgaagacgaagaagaggaaggcgaagaagagagtgaa
ctggaagcaaagcttggaggtctgaaaatcaagcaagaggaggaatag

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