Brassica rapa (field mustard): 103842117
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Entry
103842117 CDS
T03449
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103842117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103842117
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103842117
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
WPP
LRR_CARMIL
LRR_6
LRR_TMOD-LMOD
LRR_1
LRR_NLRC4
LRR_MHP1-HER1-GIP3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
103842117
NCBI-ProteinID:
XP_009116980
UniProt:
M4CU36
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All DBs
Position
A09:38264120..38266443
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AA seq
535 aa
AA seq
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MDHSVKTPPVLSVKMWPPSKSTRLMLVDRMTKNITTPSIFSRKYGLLSLQEAEEDAKRIE
ELAFATANKHFQSEPDADGTSAVHVYAKESSKLMLEVIKRGPQQVDSEAEGNVDGDTLFD
LSGGRRAFIDLEEARELLRPLAEPNNSFTKIRFSNRSFGSEAAKFAVGVLSSVKDQLTEV
DLSDFVAGRPEAEALEVMTMFSSALEGSNLRSLNLSDNALGEKGIRAFASLIKSQRGLEE
LYLMNDGISEDAARAVRELLPSTGEIRVLQFHNNMTGDEGAIAIAEIVKQCPSLEDFRCS
STRIGSDGGVALAEALASCSRLKKLDLRDNMFGVEGGVALAETLSVLSELTEIYMSYLNL
EDEGAEALSEALVKSAPRLEVIELAGNDVTVKAAGKLAECIASKESLSKLNLSENELKDE
GTILIAKALEEGHDQLTEVDLSTNMMRRAGARALAQTVLKKPTLKLLNINGNFISEEGVD
EVSDMFKDSPDKLGPLDDNDPEGEDFEDEDEEEEGEEESELEAKLGGLKIKQEEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcagttaaaaccccacctgttctatccgtaaagatgtggccaccaagcaag
agcacacgcctcatgctcgtcgaccgcatgaccaagaacatcaccaccccttccatcttc
tcccgaaagtacggtctcttgagcctccaagaagctgaggaggacgccaagcgcattgaa
gaacttgctttcgccaccgccaacaaacacttccagagcgagcctgacgctgatggcacc
tctgctgtccacgtctacgccaaagagtccagcaagcttatgctcgaagtcatcaaacgt
ggtccgcaacaggttgattccgaggccgaggggaacgtcgatggggacaccttgtttgat
ttatctggtggacgtagagccttcattgatctagaggaggcgcgcgagcttctgaggcct
ctcgctgagccgaacaactccttcaccaagatccgtttcagcaacaggagcttcggctcc
gaggctgctaaattcgctgtaggcgtcttgtcttccgtcaaggaccagctgaccgaagtg
gatctctcggacttcgtcgcggggagaccggaggcggaagccctcgaagtcatgaccatg
ttttcgtccgccttggagggctctaacctcaggtctttgaatctttccgacaacgccttg
ggagagaaaggcatccgtgcgtttgcctctctcatcaagtctcagcgtggcttggaggag
ctttacctcatgaacgacggcatttcggaggatgctgcgagagcggtccgcgagctgctt
ccatctactggcgagatcagggttcttcagtttcataacaacatgactggagacgaagga
gccatcgccattgcggagattgtgaagcagtgtccgtctctggaggatttcaggtgttcg
tccacgaggattggctctgacggaggtgttgcgcttgctgaagcgcttgcgtcatgtagc
cgcttgaagaaacttgatctccgtgacaacatgtttggagttgaaggtggggttgccctg
gcagagaccttgtcagtgttgagtgagttgactgagatctatatgagttacctgaacttg
gaggatgagggagcagaggcgctttccgaagctctggttaagtctgctcctcgtcttgaa
gttatagagttggctgggaatgatgttactgtaaaagccgctgggaaactggcggaatgc
atcgcgtccaaagagtctctttcgaagctgaatctgtctgagaatgaactcaaagacgaa
gggactatcttaatcgcaaaggcgcttgaagaaggtcatgaccagttgactgaagttgat
ctgagcaccaacatgatgaggagagctggggcgagggccttggcgcaaactgttttgaag
aaacctactttgaagcttttgaacatcaacggaaacttcatatctgaggaaggtgtggac
gaggtgagtgacatgtttaaggactcaccggacaagcttggtcctctggatgataatgac
ccggaaggagaagattttgaagatgaagacgaagaagaggaaggcgaagaagagagtgaa
ctggaagcaaagcttggaggtctgaaaatcaagcaagaggaggaatag
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