Brassica rapa (field mustard): 103842152
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Entry
103842152 CDS
T03449
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103842152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103842152
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
103842152
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-RING_UBOX
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103842152
NCBI-ProteinID:
XP_033134868
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Position
A09:38402622..38405129
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AA seq
372 aa
AA seq
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MVRLRSGGDSGPSPDEPGSSGTHGGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFR
HLFGTRIALAYQKEMKLVGQMLYFVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRAL
FILYQTAVPYIAERISSRAATQAFTFDEDDQSPRMVDLPSSASSVLTRFKDRVQRLWHRA
IRRWPVVLPVAREVLQVLLRANLMLFYFEGLYYHISKRASGVRYVFIGKQLNQRPRYQIL
GVFLLIQLCILAAEGLRRSNLSSITSSVQQASLGSYQTSGGRGLPVLNEEGNLITPEAEK
GNWSPSDATSTTEAVGKCTLCLSSRQHPTATPCGHVFCWSCIMEWCNEKQECPLCRTPNT
HSSLVCLYNSDF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcttcgtagcgggggcgattcgggcccgagcccggacgaaccaggctcaagt
ggaactcatggcggaatccggcgattcccgctcgcagctcagccggagataatgagagcg
gcagagaaagacgatcaatacgcttctttcatccacgaagcctgccgcgacgccttccga
caccttttcggtacaagaattgctcttgcttaccaaaaagagatgaaacttgttgggcag
atgctttacttcgttctgacgactggttcagggcaacaaactttaggagaggagtattgt
gacattatacaggttgcaggaccttatgggctctctcctacacctgctagacgcgctttg
ttcatactgtatcagactgcagttccctatatcgccgagaggattagttcaagagctgcc
acgcaagcgtttacctttgatgaggatgatcagtcaccgagaatggttgatcttccgtct
tcagcttcttctgtattaactaggttcaaagatagagttcagaggttgtggcaccgagct
attcgaagatggcctgtggttctccctgttgcccgtgaagtcttacaagtgcttctccgt
gccaatttgatgctcttctactttgaaggtctatattatcatatatcgaaacgtgcctct
ggggttcgttatgtattcataggaaagcaattgaatcagagacctagataccaaattctc
ggggttttccttttaatccagttgtgcatccttgctgctgaaggcttgcgtcggagtaat
ttgtcatctatcacaagctcagttcagcaggcgtctctaggatcttatcaaacctcagga
gggagagggttgcctgttttaaacgaagagggaaatttgattactccagaagctgagaag
ggaaactggtctccctccgatgcaacttcaactaccgaggcagtaggaaaatgcactctc
tgcttaagcagccgtcagcacccgacggccactccttgtggtcatgtattttgttggagc
tgcattatggaatggtgcaatgagaagcaagaatgcccactttgtcgaacacccaacacc
cactcaagtttagtttgtttgtacaattctgatttttaa
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