Brassica rapa (field mustard): 103842208
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Entry
103842208 CDS
T03449
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103842208
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP100
103842208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
AAA_28
Mg_chelatase
Zeta_toxin
AAA_7
AAA_24
NBD_SMAX1
AAA_18
ABC_tran
TniB
NACHT
Torsin
AAA_25
T2SSE
DUF6933
PduV-EutP
CLP1_P
Motif
Other DBs
NCBI-GeneID:
103842208
NCBI-ProteinID:
XP_009117080
UniProt:
M4CUC2
LinkDB
All DBs
Position
A09:38692499..38696433
Genome browser
AA seq
974 aa
AA seq
DB search
MASRRLSKSTASAAIRAYNAFSTPSLLLRSRAISAASAHHFTSRSSPTSSLLRPNSLIGA
PGNAANSITHGRQLLPLSFQFLSPRRFSATAAQTNQNSYTEMAWEGILNAFDAARVSKQQ
IVESEHLMKALLEQKDGLARRIFAKAGIDNSSVLQATDAFISTQPKVTGDTSGQVLGSSL
STVLQNAERYKKEFQDDYVSVEHLLLAFYSDKRFGQEFFKNLKLKEEALKEVVKEVRGSQ
RVTDQNPEGKYDALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGE
PGVGKTAIAEGLAQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVLKEVT
ASNGQTILFIDEIHTVVGAGATGGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKDP
ALERRFQQVLCGQPSVEDTISILRGLRERYELHHGVKISDGSLVSAAVLSDRYITERFLP
DKAIDLVDEAAAKLKMEITSKPTELDEIDRAVIKLEMEKLSLKNDTDKASKERLHKIEND
LTALKEKQKELSDQWEQEKSLMTRIRSFKEEIDRVNLEIESAEREYDLQRAAELKYGTLM
SLQRQLEEAEKNLTKFRESGQSLLREEVTDLDIAEVVSKWTGIPLSNLQQSEREKLVMLE
QVLHKRVVGQDMAVKSVSDAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLF
NTENAIVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAH
PDVFNILLQLLDDGRITDSQGRRVSFTNCVVIMTSNIGSHHILETLGNSEDGKEAVYELM
KRQVVDLARQTFRPEFMNRIDEYIVFQPLDSKEISKIVELQLERVKNRMEQKKIKLHYTK
EAVDLLSQLGFDPNYGARPVKRVIQQMVENEIAVEVLKGDFAEEDTILLDVDQTSNKLVI
KKLENNAPIEEMAA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaggagactatccaagtccaccgcttctgcagccatcagagcctataacgct
ttctccacaccctctctcctcctccgctctcgcgctatctccgccgcctctgctcaccac
ttcacatcgcgttcctctcccacctcctctcttctccggccaaattccctcatcggagct
cccggaaacgccgcaaactcgatcactcatggccgacaactgctacctctctctttccaa
ttcctttctccgcgccgcttctccgccaccgcagctcagactaatcagaactcgtatacg
gagatggcttgggaagggattctcaacgccttcgacgcggctcgcgtctctaagcagcag
atcgtggagtctgagcatttgatgaaagctctcttggagcagaaagacggtctcgccagg
aggatattcgctaaggctgggatcgacaatagctctgttctccaggctactgacgcattc
atctccacacagcctaaggttactggtgataccagtggtcaggtgctagggtcgtctctc
agtactgtgttgcaaaacgcggagaggtataagaaggagtttcaagatgattatgtgtct
gttgaacaccttctgctggcgttttattcggacaaaaggtttgggcaagagttttttaag
aacctgaaacttaaagaggaggccttgaaggaagttgttaaagaggtccgcggtagtcaa
cgagttactgatcaaaatcctgaaggaaagtatgatgcgcttgaaaagtatgggaatgat
ttaactgagatggccagacgagggaaactggatcctgtcattgggagggatgatgagatt
cggcggtgcatccagatattgtgcaggaggacgaaaaacaatcctgttatcatcggtgag
cctggtgttggcaaaactgcaatcgctgaagggttggcgcagcgaattgtacgaggggat
gtccctgaacctcttatgaataggaagttaatatctcttgacatgggttcgctgcttgct
ggtgccaaatttcgaggagattttgaggaacggttgaaagcagtactgaaggaagtcact
gcttccaatggacagacaatcttgttcattgatgaaattcacactgttgttggtgcagga
gctaccggtggagcaatggatgcgagcaacctcttgaaaccaatgcttggaagaggtgaa
ctgagatgcattggtgctactacactgactgaataccgcaaatacatcgagaaagaccca
gctctggaacgtaggtttcaacaagtgttatgtggccaaccatctgttgaagacaccatt
tcgattcttcgtgggttaagagagcgttacgagttacaccatggtgttaaaatatcagat
ggttcccttgtttcagcagcggttctgtcagaccgctacatcactgaacgcttcctgcca
gacaaagctattgatcttgttgacgaagctgctgcaaagctgaagatggagatcacttct
aaaccaactgaactcgacgaaatagacagagctgtgatcaaactggagatggagaagctt
tccttgaaaaacgacactgataaagcatcaaaagaacgccttcataagattgagaatgat
ttgaccgctctcaaagaaaaacagaaagaactcagtgaccaatgggagcaagaaaagtct
ctcatgactagaatacgttcatttaaagaagagatcgatcgtgtcaacctggaaatcgaa
tctgctgaacgtgaatatgatctacaacgtgctgctgagctcaaatatggaacacttatg
tcccttcaacgccaattagaagaagctgagaaaaacctcaccaagttcagagagtctgga
cagtcactactccgggaagaggtaaccgatcttgacatagcagaggtagtaagcaagtgg
accggtattccactgtcgaatcttcagcagtcagagagagagaagctggtcatgctggaa
caagtgctccacaagagagttgttggtcaagacatggctgtaaaatcagtatcagatgct
atccggcgttcaagggccggtctctctgatcctaaccgtccaatagccagcttcatgttc
atgggtcccacaggtgttggcaaaaccgagctcgccaaagctctggccggataccttttt
aacactgagaacgcaatcgtgaggatcgacatgagcgagtacatggaaaaattctcagtc
tcgcggctcgttggtgcaccacctggctatgtcggttatgaagaaggtggacagttgact
gaagctgttcgtagaagaccctactcagtggttttgttcgatgagatcgagaaagcccat
cctgatgtcttcaacatcctgctgcagcttctcgacgatggaaggataactgattctcaa
gggaggagagtgagtttcacaaactgtgttgtgattatgacctctaatataggatcccac
cacatactcgagactctcggaaacagtgaagacggcaaagaagcagtgtatgagttgatg
aagcggcaggttgtggacttggcaagacaaactttcaggccagagttcatgaacaggatc
gatgagtacatagtctttcagccgctagattcgaaggaaatctccaaaatcgttgagttg
cagctggaacgagtgaagaacaggatggaacagaagaaaataaagcttcactacacaaaa
gaagcagtggatcttctttctcagcttgggtttgatcccaactatggagcaaggcctgtt
aagagggtgatccaacagatggtggagaacgagatcgccgttgaagttttgaaaggagat
tttgcagaggaggacactatccttctggatgttgaccagacaagcaacaaattggtcatc
aagaagcttgagaacaatgctcctatcgaagaaatggcagcttga
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