Brassica rapa (field mustard): 103842240
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Entry
103842240 CDS
T03449
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103842240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103842240
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103842240
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2786
Motif
Other DBs
NCBI-GeneID:
103842240
NCBI-ProteinID:
XP_009117111
UniProt:
A0A397YB48
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Position
A09:complement(38859470..38865094)
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AA seq
733 aa
AA seq
DB search
MEFKRDNTVRFYGEEKQTLEATEKRQPLPMFKPSTTQFLKPELVIPKKTNKTRLFKLPRF
GGLKVFPENFEIERDKILDPGGDVVLQWNRVFLFWCLVALYVDPLFFFLSSVKNTGRSSC
MTTDLKLGIVITFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLR
SDFIVDLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEII
KATGVVTTTAWAGAAYNLLQYMLASHILGAAWYLLSIERQATCWKAECHNELGPIRCVTD
FFDCGTVNREDRNNWQNVTVVFSNCDPSNKIRFTFGIFADALTKNVVSSPFLEKYLYCLW
FGLQQLSSYGQNLDTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLK
RRDTEEWMGHRQLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDL
VRRVPLFAQMDDQLLDAICERLVSSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGR
TGFFNSITLKPGEFCGEELLAWALLPKSKVNLPSSTRTVRALEEVEAFALQAEDLKFVAN
QFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRRMLAKSLSLAESYSSYEEEEAL
AAAAAEEIMSQQEERQSSTPSRHHTSIGKPHFAATVLASRFAKNTRRASRKMKDVDVPML
PKPEEPDFSVDAD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaaagagacaatactgtcagattctatggagaagagaagcaaaccctagaa
gcaacagagaagcgtcagccattaccaatgttcaaaccatcaacaactcaatttctaaaa
ccagagttagtaatccccaaaaagactaacaaaacccgtctcttcaaactcccaagattc
ggtggactcaaagtgttcccggagaacttcgagatcgagagagacaagattctcgatcct
ggtggtgacgtagtgcttcaatggaacagagttttcctcttctggtgtctcgttgctctt
tacgtcgaccctttgttcttcttcctgtcttcagtcaaaaacactggtcgatcctcttgt
atgaccacagatttgaaactcggaatcgtcatcactttcttcagaacactagcggatctc
ttctatgtcttgcacattgtcatcaagttcagaacagcttacgtctctcgcacttcaaga
gtgtttggtcgtggagagcttgtgaaagatccgaagctgatagctagaagatacttgaga
tcagatttcatcgttgatctcatcgcttgcttgccccttcctcagattgttagttggttt
atcttgccatcaatcagaagctctcactcggaccatacaacaaatgcacttgtcctcatt
gttctagttcagtacattcctaggctttatcttattttccctctaagcgctgagattatc
aaagcgaccggagttgttacaaccaccgcttgggctggtgctgcttataaccttcttcag
tatatgctcgctagtcatattcttggtgcggcatggtatctactgtccatagagcggcaa
gcaacgtgttggaaagcagaatgtcataacgaattaggtccaatacgatgtgttactgat
ttctttgactgtggtacagtgaaccgagaggataggaataactggcagaatgtaactgtt
gtcttcagcaactgtgatccttcgaacaagatacggttcactttcggcattttcgcagat
gctctcaccaaaaatgtagtctcatctcccttcttggagaagtacttgtattgcctatgg
tttggtttgcagcaactaagttcttacggacagaatcttgacacaagtacatctgttcta
gagacaatgtttgccatcctcgtggctatctttggtctggttttgtttgctcttttaata
ggaaacatgcagacgtacttgcaatcgataacggtgaggctagaggagtggagactgaag
agaagagacacagaagaatggatgggacatcgtcaactacctcagaacttaagagaaaga
gtgagacgttttgttcagtacaaatggttagccactagaggagttgatgaagagaccatt
cttcattcactacctgctgatcttcgaagagacatccaacgacatctctgtctcgacctt
gttcgtcgtgtaccgctatttgcgcaaatggatgatcagttactagatgccatatgcgaa
cggttagtgtcatctctaagcacgcaagggaactacattgtacgtgaaggtgatccagtg
accgaaatgctcttcatcatccgtggaaagctcgaaagctcgacgactaatggaggcagg
acaggattcttcaactcaatcacactcaaaccaggagagttctgtggagaagagcttctc
gcttgggccttacttccaaaatcgaaagtaaacctaccttcctcgacaagaacggtgcga
gcgttagaagaagttgaagcctttgctttacaagcagaggatctcaagtttgtggctaac
cagttcagacgtttgcatagcaagaagctgcaacacacattccgttactactctcaccag
tggagaacttgggctgcttgcttcgtgcaagtggcttggagacggtataagaggagaatg
ctggctaagagtcttagcttggctgagtcatactcttcttatgaagaagaggaagctctt
gcagctgctgcggccgaggagataatgagtcaacaagaagagagacagagcagtactccg
tcgcgccatcatacttctattgggaaaccgcattttgctgcaacggtgcttgcttcgagg
tttgctaagaacacgaggagggcttctcgtaagatgaaggacgttgatgtaccgatgctt
cctaaaccggaagaaccggatttctctgtggatgcagattaa
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