Brassica rapa (field mustard): 103842343
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Entry
103842343 CDS
T03449
Name
(RefSeq) nuclear transcription factor Y subunit A-6 isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103842343
Transcription factors [BR:
brp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
103842343
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
103842343
NCBI-ProteinID:
XP_009117212
UniProt:
A0A398AUR3
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All DBs
Position
A01:complement(25547835..25550141)
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AA seq
308 aa
AA seq
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MQEFHSKDSLSSPTTSWGNSVLSNSNVQGSSSSAMTDNNNNNNTLSLTMEMMSAHFPGMK
QTGFQLQGHDDSSSTLSTGGGESSGDVASLGGHNSNNRYGHNFVTHLSGHKEIAVSPSGS
HPKSILSKVSQNSAPPPTIEASWPLHGNCFMSFPYASQHMVQQHPQIGGLMIPSRILLPH
NIPENEPIFVNAKQYQAILRRRQHRAKLEAQNKLIKARKPYLHESRHLHALKRARGSGGR
FLNTKKLQESKSPPFLATSVKFRQREILGVAVGSSGPELTGNNMDMFQQDPQLRFSGYPS
NHHVSVLM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagtttcatagcaaagattcattgtctagtcctacaacttcttggggaaactct
gtgttatctaactcaaacgtccaaggatcatcatcatcagccatgaccgacaacaacaac
aacaacaatacgttaagcttgactatggagatgatgtctgcccatttcccagggatgaaa
caaactggttttcaattgcagggtcatgatgattcttcctctacactatccactggagga
ggagaatcatctggtgacgttgcaagtttggggggacataatagtaataatcgttatggc
cacaactttgttacccatctctcaggtcacaaagaaatcgcagtgagtcctagtggaagt
catccaaaatcaatcttgtcgaaggtctctcaaaactcagctcctcctcctactattgag
gcttcttggcctctacatggcaattgtttcatgtcttttccatatgcatcacaacacatg
gtgcagcagcatccacaaattggagggttgatgataccttctcgaatccttctgcctcac
aacattccagagaacgaaccaatcttcgtcaatgccaaacaataccaagccattctccgt
cgcaggcagcaccgtgcaaagcttgaagctcagaacaagctcatcaaagcccgtaaacca
taccttcacgagtctcgccaccttcatgcgttaaagagagctagaggctctggtggacgt
ttcctcaacacaaagaagcttcaagaatcaaaatctcctccattcttggccacatcggtc
aagttcagacagagggagattttgggcgttgcggtcgggtctagtggcccggagttaact
gggaacaacatggacatgttccaacaagacccacaactcagattctcaggttatccatca
aaccaccatgtctcagttctcatgtga
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