Brassica rapa (field mustard): 103842426
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Entry
103842426 CDS
T03449
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.3
KO
K14487
auxin responsive GH3 gene family
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103842426
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
103842426
NCBI-ProteinID:
XP_009117296
UniProt:
M4FDL5
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Position
A09:39323621..39327541
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AA seq
596 aa
AA seq
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MIVDLALKSPMIHTPQSDKDLKALRFIEEMTRKVDFVQKKVIKEILSRNSETEYLKRFGL
KGSTDRKTFKNKVPVITYDDIKPEIQRIANGDRSMILSSHPITEFLTSSGTSAGERKLMP
TIEEDMDRRQLLYSLQMPVMNLYVPGLGKGKALHFLFVKSESKTPGGLPARPVLTSYYKS
EHFKKRPYDPYNVYTSPNEAILCPDSSQSMYTQMLCGLLMRHEVLRLGAVFASGLLRAIR
FLQTNWHELVNDISTGTLSSRISDPGIRESMSKILTKPDQELADYIASVCCHDSNWEGVI
TKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMACTMYASSESYFGINLKPMCKPSEVS
YTIMPNMAYFEFLPHEDATERTTELVELADVEVGKEYELVITTYAGLYRYRVGDILQVTG
FYNSAPQFKFVRRKNVLLSIESDKTDEAELQKAVENASVLLEEQGTRVIEYTSYADTKTI
PGHYVIYWELLVKDQANPPSDEVMAKCCLEMEESLNSVYRQSRVADKSIGPLEIRVVKNG
TFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVASTHFSPALPQWSPERRR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgatttagctttgaagtctccgatgatccatacaccacagtccgacaaggac
ttgaaagctctcaggttcattgaggagatgacacgtaaagtcgatttcgttcagaagaaa
gtcatcaaggagatacttagtcgtaactcagagactgagtatctgaaacggttcggtctt
aagggatccaccgaccggaaaacatttaagaacaaagttccggttattacttatgatgat
attaaaccggagattcaacgtatagcaaatggtgaccggtccatgattttgtcttctcac
cccatcaccgagttcctgaccagctctggcacttctgctggtgaaaggaagttaatgccg
actattgaagaagacatggaccgacgtcagcttttatacagtcttcagatgcctgtgatg
aacctctacgtgccgggactaggcaaaggcaaagctctacatttcttgttcgtgaagtcg
gaatcaaagacacctggtggattaccggcgcgtccggttctcacaagctattacaaaagc
gaacatttcaagaaacgtccatacgacccctacaacgtgtacacgagccccaacgaagcc
atcctttgtccagactcgtcgcaaagcatgtacactcaaatgctttgtggtctcctcatg
cgtcacgaagtccttcgtctcggtgctgtcttcgcttccggtctcctccgtgccatacgg
ttcctccaaaccaactggcatgagctcgtcaacgatatctcaaccggaaccctaagctcg
agaatctctgacccggggatcagagaaagcatgtccaagatcttgaccaaaccggaccaa
gaattggctgactacatagcttcggtttgttgtcacgacagtaactgggaaggtgttata
actaagatttggcccaacactaagtaccttgacgtcatcgtcacgggagccatggctcag
tatattccgatgcttgagtactatagcggcgggttaccgatggcttgtacgatgtacgca
tcgtcagagagttactttgggattaacctaaaaccgatgtgtaaaccttctgaggtttct
tacaccattatgccaaacatggcttacttcgagtttctccctcatgaagacgcaactgaa
agaacaaccgagctcgtggagctggctgatgtcgaggtggggaaagagtacgagctcgtg
atcactacctacgcggggctttaccgctacagagttggcgatattcttcaggtgactggc
ttctacaactccgctccgcagttcaagttcgtgaggaggaagaacgttttgcttagcatc
gagtctgataaaaccgacgaagctgagctccaaaaggcggtagagaacgcgtcggtgtta
cttgaggagcaaggaacacgcgtgatcgagtacacgagctacgcggataccaagaccata
cctggccattacgtcatctactgggagcttcttgtgaaggatcaagccaaccctccgagc
gacgaggtcatggctaagtgctgtcttgaaatggaggagtcgttgaactctgtttataga
caaagccgggttgctgataagtccattggaccgctcgagatacgtgtggtgaagaacggg
acgtttgaggagctcatggactatgccatctcgagaggcgcgtcgattaaccagtacaag
gtgccgagatgtgtgagtttcacgccaatcatggagctgcttgactcaagggttgcttct
acacatttcagcccggcgttgccacagtggtcacctgaacgacgtcgttga
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